MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 4676 to 4700 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 3352827 3352839 AAAAAG 12 - 2 CTTTTT AT1G10220 3351923 3353122 + Genic 904
NC_003070.9 3353222 3353237 AAATTG 15 + 2 ATTGAA AT1G10220 3351923 3353122 + Intergenic 1299
NC_003070.9 3353475 3353487 AATTC 12 - 2 AATTG AT1G10220 3351923 3353122 + Intergenic 1552
NC_003070.9 3354206 3354220 AAAAAC 14 - 2 TTTTGT AT1G10225 3354243 3354856 + Intergenic -23
NC_003070.9 3354315 3354329 AAAAC 14 - 2 TTTTG AT1G10225 3354243 3354856 + Genic 72
NC_003070.9 3354537 3354550 AAGGCG 13 - 2 TTCGCC AT1G10225 3354243 3354856 + Genic 294
NC_003070.9 3354610 3354622 AAAGCG 12 - 2 CTTTCG AT1G10225 3354243 3354856 + Genic 367
NC_003070.9 3355179 3355191 AAAAT 12 + 2 AAAAT AT1G10225 3354243 3354856 + Intergenic 936
NC_003070.9 3355878 3355892 AAGACG 14 + 2 GAAGAC SK18 3355675 3356151 + Exon 203
NC_003070.9 3356103 3356115 AAGAGG 12 + 2 GAAGAG SK18 3355675 3356151 + Exon 428
NC_003070.9 3358186 3358198 AAATAC 12 + 2 ACAAAT FRS11 3356627 3359853 - Intron 1655
NC_003070.9 3359840 3359852 AAAGG 12 - 2 TCCTT FRS11 3356627 3359853 - Exon 1
NC_003070.9 3361837 3361850 AAAAGT 13 + 2 TAAAAG AT1G04783 3361410 3362012 - Genic 162
NC_003070.9 3362545 3362559 AAG 14 + 4 AGA AT1G04783 3361410 3362012 - Intergenic -533
NC_003070.9 3362859 3362872 AAACTG 13 - 2 AGTTTC GRP23 3363432 3366493 + Intergenic -560
NC_003070.9 3363570 3363585 ACCACT 15 + 2 ACCACT GRP23 3363432 3366493 + Exon 138
NC_003070.9 3365188 3365200 ACCATC 12 - 2 GTGATG GRP23 3363432 3366493 + Exon 1756
NC_003070.9 3366734 3366747 AGATG 13 - 2 ATCTC AT1G10280 3366493 3369125 - Genic 2378
NC_003070.9 3367226 3367239 ACGGCC 13 + 2 ACGGCC AT1G10280 3366493 3369125 - Genic 1886
NC_003070.9 3369042 3369060 AAG 18 + 6 GAA AT1G10280 3366493 3369125 - Genic 65
NC_003070.9 3369103 3369115 AC 12 - 6 TG AT1G10280 3366493 3369125 - Genic 10
NC_003070.9 3370382 3370401 A 19 - 19 T ADL6 3370402 3377463 + Intergenic -1
NC_003070.9 3370736 3370748 AGATCG 12 - 2 CTCGAT ADL6 3370402 3377463 + Exon 334
NC_003070.9 3374542 3374558 A 16 - 16 T ADL6 3370402 3377463 + Intron 4140
NC_003070.9 3377874 3377889 ACAGAG 15 - 2 TCTCTG AT1G10300 3377878 3380414 + Genic -4