MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 5201 to 5225 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 3745655 3745677 A 22 + 22 A AT1G11175 3744858 3745655 + Genic 797
NC_003070.9 3745916 3745928 AAAGTG 12 + 2 TGAAAG SCAMP2 3745774 3748557 + Intron 142
NC_003070.9 3747140 3747152 AAGTG 12 - 2 TTCAC SCAMP2 3745774 3748557 + Intron 1366
NC_003070.9 3747539 3747552 AAAAAT 13 - 2 TATTTT SCAMP2 3745774 3748557 + Intron 1765
NC_003070.9 3747731 3747743 AAACAG 12 - 2 TTTCTG SCAMP2 3745774 3748557 + Intron 1957
NC_003070.9 3748086 3748099 AAACCC 13 - 2 TTGGGT SCAMP2 3745774 3748557 + Exon 2312
NC_003070.9 3748426 3748441 AAAAAT 15 - 2 TTTTAT SCAMP2 3745774 3748557 + Exon 2652
NC_003070.9 3748461 3748473 AAAAGT 12 + 2 AGTAAA SCAMP2 3745774 3748557 + Exon 2687
NC_003070.9 3749549 3749563 AAG 14 - 4 CTT AT1G11185 3749510 3750035 + Genic 39
NC_003070.9 3750239 3750251 AAAAG 12 + 2 AAAAG BFN1 3750066 3752780 - Exon 2529
NC_003070.9 3751104 3751116 AAAAT 12 - 2 TTATT BFN1 3750066 3752780 - Intron 1664
NC_003070.9 3751627 3751640 A 13 + 13 A BFN1 3750066 3752780 - Intron 1140
NC_003070.9 3751877 3751889 AAAATG 12 + 2 AAATGA BFN1 3750066 3752780 - Intron 891
NC_003070.9 3753468 3753480 AAG 12 - 4 CTT AT1G11200 3753213 3755658 + Genic 255
NC_003070.9 3754208 3754220 AG 12 - 6 CT AT1G11200 3753213 3755658 + Genic 995
NC_003070.9 3755274 3755287 AATCCC 13 - 2 TGGGAT AT1G11200 3753213 3755658 + Genic 2061
NC_003070.9 3755531 3755543 AACATT 12 - 2 AATGTT AT1G11200 3753213 3755658 + Genic 2318
NC_003070.9 3756007 3756019 AAGGTG 12 - 2 CTTCAC AT1G11210 3755668 3756998 - Genic 979
NC_003070.9 3756219 3756231 AAACCG 12 - 2 GTTTCG AT1G11210 3755668 3756998 - Genic 767
NC_003070.9 3756357 3756369 AAATT 12 + 2 TAAAT AT1G11210 3755668 3756998 - Genic 629
NC_003070.9 3756482 3756494 AGG 12 - 4 CTC AT1G11210 3755668 3756998 - Genic 504
NC_003070.9 3757566 3757580 AAAAG 14 + 2 AAAGA AT1G11210 3755668 3756998 - Intergenic -568
NC_003070.9 3758425 3758437 AAAC 12 - 3 TTTG AT1G11220 3759862 3761461 - Intergenic 3024
NC_003070.9 3758433 3758445 AAATC 12 - 2 TTTGA AT1G11220 3759862 3761461 - Intergenic 3016
NC_003070.9 3758611 3758624 AAT 13 + 4 AAT AT1G11220 3759862 3761461 - Intergenic 2837