MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 5551 to 5575 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 3966055 3966069 AGCGAT 14 - 2 TATCGC AT1G11740 3963054 3966850 - Genic 781
NC_003070.9 3966174 3966186 AAAGAG 12 + 2 AGAAAG AT1G11740 3963054 3966850 - Genic 664
NC_003070.9 3966388 3966400 ACGGAG 12 - 2 GTCTCC AT1G11740 3963054 3966850 - Genic 450
NC_003070.9 3967050 3967063 AAATTC 13 + 2 ATTCAA AT1G11740 3963054 3966850 - Intergenic -200
NC_003070.9 3967483 3967496 AACAGC 13 - 2 CTGTTG CLPP6 3967476 3969877 + Exon 7
NC_003070.9 3967654 3967666 AACTCG 12 + 2 CTCGAA CLPP6 3967476 3969877 + Exon 178
NC_003070.9 3967959 3967971 AATC 12 - 3 GATT CLPP6 3967476 3969877 + Intron 483
NC_003070.9 3969086 3969099 AG 13 - 6 TC CLPP6 3967476 3969877 + Intron 1610
NC_003070.9 3969818 3969830 AATGCC 12 + 2 CAATGC LEW1 3969681 3971911 - Exon 2081
NC_003070.9 3970760 3970773 AAAAAC 13 + 2 AAAAAC LEW1 3969681 3971911 - Intron 1138
NC_003070.9 3971691 3971704 AATCGG 13 + 2 ATCGGA LEW1 3969681 3971911 - Exon 207
NC_003070.9 3973278 3973293 AAG 15 - 5 TTC MED32 3971986 3973294 - Exon 1
NC_003070.9 3974705 3974724 A 19 - 19 T AT1G11765 3973874 3974594 + Intergenic 831
NC_003070.9 3975531 3975545 A 14 + 14 A AT1G11770 3975607 3977379 + Intergenic -62
NC_003070.9 3975666 3975679 A 13 + 13 A AT1G11770 3975607 3977379 + Genic 59
NC_003070.9 3976121 3976133 ACCGGC 12 - 2 CGGTGC AT1G11770 3975607 3977379 + Genic 514
NC_003070.9 3977199 3977211 AAAGTG 12 + 2 GTGAAA AT1G04887 3975947 3977255 - Genic 44
NC_003070.9 3980156 3980170 ACCATC 14 + 2 CATCAC AT1G11785 3979823 3981079 - Genic 909
NC_003070.9 3980218 3980230 ACCATC 12 + 2 CACCAT AT1G11785 3979823 3981079 - Genic 849
NC_003070.9 3980310 3980323 ACC 13 + 4 CAC AT1G11785 3979823 3981079 - Genic 756
NC_003070.9 3980810 3980823 AAGAG 13 + 2 AGAGA AT1G11785 3979823 3981079 - Genic 256
NC_003070.9 3986014 3986026 AACTTC 12 + 2 AACTTC AT1G11800 3985184 3987290 - Genic 1264
NC_003070.9 3987284 3987296 AAAATC 12 - 2 GATTTT AT1G11800 3985184 3987290 - Genic 6
NC_003070.9 3987471 3987487 AAAAAC 16 + 2 AACAAA AT1G11800 3985184 3987290 - Intergenic -181
NC_003070.9 3987641 3987653 AACATG 12 + 2 ACATGA AT1G11800 3985184 3987290 - Intergenic -351