MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 601 to 625 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 393897 393909 ACATCT 12 - 2 TAGATG AT1G02110 392831 395528 + Genic 1066
NC_003070.9 394163 394175 AAAAAC 12 - 2 TGTTTT AT1G02110 392831 395528 + Genic 1332
NC_003070.9 394470 394484 AAACAC 14 - 2 TTGTGT AT1G02110 392831 395528 + Genic 1639
NC_003070.9 395075 395087 AAGATG 12 + 2 TGAAGA AT1G02110 392831 395528 + Genic 2244
NC_003070.9 395680 395693 AACGTC 13 - 2 CGTTGA VAD1 395689 400001 + Exon 4
NC_003070.9 397033 397045 ACATCT 12 - 2 AGATGT VAD1 395689 400001 + Exon 1344
NC_003070.9 397225 397238 A 13 - 13 T VAD1 395689 400001 + Intron 1536
NC_003070.9 398995 399008 A 13 - 13 T VAD1 395689 400001 + Exon 3306
NC_003070.9 399424 399436 AG 12 + 6 AG VAD1 395689 400001 + Intron 3735
NC_003070.9 399770 399783 ACAT 13 - 3 ATGT VAD1 395689 400001 + Exon 4081
NC_003070.9 399833 399845 AATATG 12 + 2 ATATGA VAD1 395689 400001 + Exon 4144
NC_003070.9 399965 399977 AAAC 12 + 3 CAAA VAD1 395689 400001 + Exon 4276
NC_003070.9 400567 400579 AAAT 12 - 3 ATTT RA-5 399983 401919 - Intron 1340
NC_003070.9 401837 401850 AG 13 - 6 TC RA-5 399983 401919 - Exon 69
NC_003070.9 402448 402467 A 19 + 19 A AT1G04087 402086 402294 + Intergenic 362
NC_003070.9 402631 402647 AACT 16 + 4 TAAC AT1G04087 402086 402294 + Intergenic 545
NC_003070.9 402681 402695 AACT 14 + 3 TAAC AT1G04087 402086 402294 + Intergenic 595
NC_003070.9 402935 402947 ACACTG 12 + 2 CTGACA MAGO 403100 404456 - Intergenic 1509
NC_003070.9 403352 403364 A 12 + 12 A MAGO 403100 404456 - Exon 1092
NC_003070.9 403583 403596 A 13 + 13 A MAGO 403100 404456 - Intron 860
NC_003070.9 404413 404426 AAAG 13 - 3 TTTC MAGO 403100 404456 - Exon 30
NC_003070.9 404425 404438 AGATCG 13 + 2 TCGAGA MAGO 403100 404456 - Exon 18
NC_003070.9 404548 404560 AAAACT 12 - 2 AGTTTT ALG12 404600 408619 + Intergenic -40
NC_003070.9 404709 404722 AAAAAG 13 - 2 TCTTTT ALG12 404600 408619 + Intron 109
NC_003070.9 405877 405889 AAAATC 12 - 2 ATTTTG ALG12 404600 408619 + Intron 1277