MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 626 to 650 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 406175 406187 ACATAT 12 - 2 TGTATA ALG12 404600 408619 + Intron 1575
NC_003070.9 408377 408397 AATGT 20 + 4 AATGT ALG12 404600 408619 + Intron 3777
NC_003070.9 410777 410789 AG 12 + 6 GA AT1G02160 410744 411632 + Genic 33
NC_003070.9 410817 410829 CCG 12 - 4 GCG AT1G02160 410744 411632 + Genic 73
NC_003070.9 412217 412230 AAATTC 13 + 2 CAAATT MC1 411664 413554 + Exon 553
NC_003070.9 413498 413512 AAAAAT 14 - 2 TTATTT MC1 411664 413554 + Exon 1834
NC_003070.9 413652 413666 AAGAG 14 + 2 GAAGA AT1G02180 413522 414649 - Genic 983
NC_003070.9 414169 414182 AACAG 13 - 2 CTGTT AT1G02180 413522 414649 - Genic 467
NC_003070.9 414739 414751 AAATTG 12 + 2 ATTGAA AT1G02180 413522 414649 - Intergenic -90
NC_003070.9 415057 415070 AAT 13 - 4 TAT AT1G02190 415074 418027 + Intergenic -4
NC_003070.9 417592 417604 AATG 12 + 3 AATG AT1G02190 415074 418027 + Genic 2518
NC_003070.9 417609 417621 AT 12 + 6 TA AT1G02190 415074 418027 + Genic 2535
NC_003070.9 417802 417814 AATATG 12 - 2 TTCATA AT1G02190 415074 418027 + Genic 2728
NC_003070.9 418082 418096 AAAAC 14 + 2 AAAAC AT1G02190 415074 418027 + Intergenic 3008
NC_003070.9 418211 418223 ACGTAT 12 + 2 CGTATA AT1G02190 415074 418027 + Intergenic 3137
NC_003070.9 418898 418910 AAATTT 12 + 2 TTTAAA CER1 418416 422579 + Exon 482
NC_003070.9 420893 420918 ATC 25 + 8 TCA CER1 418416 422579 + Intron 2477
NC_003070.9 422872 422884 AAAATT 12 + 2 TTAAAA CER1 418416 422579 + Intergenic 4456
NC_003070.9 423233 423247 AAAAT 14 + 2 AAAAT CER1 418416 422579 + Intergenic 4817
NC_003070.9 423238 423252 AAAAAT 14 + 2 AAAATA CER1 418416 422579 + Intergenic 4822
NC_003070.9 423422 423436 AAAAT 14 + 2 AAAAT CER1 418416 422579 + Intergenic 5006
NC_003070.9 423573 423593 AAAAT 20 + 4 TAAAA AT1G08785 424479 425189 - Intergenic 1596
NC_003070.9 423752 423764 AAAAAT 12 + 2 TAAAAA AT1G08785 424479 425189 - Intergenic 1425
NC_003070.9 423807 423821 AAAAT 14 + 2 AAAAT AT1G08785 424479 425189 - Intergenic 1368
NC_003070.9 423963 423975 A 12 + 12 A AT1G08785 424479 425189 - Intergenic 1214