MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 7526 to 7550 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 5310135 5310155 ATCATG 20 + 3 ATGATC BOR4 5309907 5314128 - Exon 3973
NC_003070.9 5310327 5310340 AAAAC 13 + 2 AACAA BOR4 5309907 5314128 - Intron 3788
NC_003070.9 5311705 5311717 AAAGAC 12 + 2 ACAAAG BOR4 5309907 5314128 - Intron 2411
NC_003070.9 5312900 5312912 AAATTC 12 + 2 CAAATT BOR4 5309907 5314128 - Intron 1216
NC_003070.9 5313813 5313834 A 21 + 21 A BOR4 5309907 5314128 - Intron 294
NC_003070.9 5314503 5314515 AAAAT 12 + 2 AAATA BOR4 5309907 5314128 - Intergenic -375
NC_003070.9 5318701 5318713 ACGATG 12 + 2 GATGAC AT1G15480 5317973 5320630 + Genic 728
NC_003070.9 5318757 5318769 ACTATC 12 - 2 TAGTGA AT1G15480 5317973 5320630 + Genic 784
NC_003070.9 5323875 5323887 AAAC 12 - 3 TTTG AT1G15490 5320615 5323895 - Genic 8
NC_003070.9 5323934 5323947 AAAAT 13 - 2 TTATT AT1G15490 5320615 5323895 - Intergenic -39
NC_003070.9 5324127 5324139 AAAAG 12 + 2 AAAGA AT1G15490 5320615 5323895 - Intergenic -232
NC_003070.9 5324456 5324476 A 20 + 20 A AT1G15490 5320615 5323895 - Intergenic -561
NC_003070.9 5324639 5324651 AAAATG 12 - 2 TCATTT AT1G15490 5320615 5323895 - Intergenic -744
NC_003070.9 5324732 5324746 AACTAC 14 - 2 TTGTAG AT1G15490 5320615 5323895 - Intergenic -837
NC_003070.9 5325535 5325548 AAG 13 - 4 TCT ATNTT2 5326290 5328875 + Intergenic -742
NC_003070.9 5327231 5327243 ACTGCT 12 + 2 CTGCTA ATNTT2 5326290 5328875 + Intron 941
NC_003070.9 5327592 5327604 AAG 12 + 4 AAG ATNTT2 5326290 5328875 + Exon 1302
NC_003070.9 5328828 5328841 AATACC 13 + 2 ATACCA ATNTT2 5326290 5328875 + Exon 2538
NC_003070.9 5328879 5328891 AGAGG 12 - 2 TCCTC ATNTT2 5326290 5328875 + Intergenic 2589
NC_003070.9 5328989 5329001 AACTTC 12 - 2 TTGAAG ECB2 5329064 5331711 + Intergenic -63
NC_003070.9 5329269 5329281 AACTCG 12 - 2 TCGAGT ECB2 5329064 5331711 + Exon 205
NC_003070.9 5329761 5329775 AACATG 14 - 2 GTTCAT ECB2 5329064 5331711 + Exon 697
NC_003070.9 5330575 5330587 AAAATG 12 + 2 AAATGA ECB2 5329064 5331711 + Exon 1511
NC_003070.9 5332895 5332907 AAAAAC 12 - 2 TTTTGT ABCG40 5331858 5338326 - Intron 5419
NC_003070.9 5333942 5333955 AAAAC 13 + 2 AAACA ABCG40 5331858 5338326 - Intron 4371