MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 7926 to 7950 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 5614462 5614474 AAAAAC 12 + 2 ACAAAA AT1G16430 5614593 5615660 + Intergenic -119
NC_003070.9 5614956 5614968 AATC 12 + 3 TCAA AT1G16430 5614593 5615660 + Genic 363
NC_003070.9 5616902 5616914 AAATCG 12 - 2 CGATTT RSH3 5615808 5617672 + Exon 1094
NC_003070.9 5617065 5617077 AAATCC 12 + 2 AAATCC RSH3 5615808 5617672 + Exon 1257
NC_003070.9 5617519 5617533 AAGGAG 14 + 2 AGAAGG RSH3 5615808 5617672 + Exon 1711
NC_003070.9 5617675 5617691 AAAAAG 16 - 2 CTTTTT RSH3 5615808 5617672 + Intergenic 1867
NC_003070.9 5619725 5619737 AATACT 12 + 2 TAATAC RDH2 5619545 5622674 - Exon 2937
NC_003070.9 5621701 5621713 AATCC 12 - 2 TTGGA RDH2 5619545 5622674 - Exon 961
NC_003070.9 5622696 5622711 AACGCG 15 - 2 TTCGCG RDH2 5619545 5622674 - Intergenic -22
NC_003070.9 5622807 5622819 AAGAG 12 - 2 CTTCT PAB1 5622746 5625683 + Exon 61
NC_003070.9 5622849 5622867 AG 18 - 9 CT PAB1 5622746 5625683 + Exon 103
NC_003070.9 5622891 5622903 AAGCTG 12 + 2 GAAGCT PAB1 5622746 5625683 + Exon 145
NC_003070.9 5623005 5623017 AAACC 12 + 2 AACCA PAB1 5622746 5625683 + Exon 259
NC_003070.9 5623665 5623680 AAAAAC 15 - 2 TTGTTT PAB1 5622746 5625683 + Intron 919
NC_003070.9 5624990 5625002 AATATG 12 - 2 TTCATA PAB1 5622746 5625683 + Intron 2244
NC_003070.9 5625127 5625144 AC 17 + 8 AC PAB1 5622746 5625683 + Intron 2381
NC_003070.9 5625141 5625153 ACAT 12 + 3 ACAT PAB1 5622746 5625683 + Intron 2395
NC_003070.9 5626490 5626503 AAGCTG 13 - 2 TTCAGC AT1G16480 5625699 5629013 - Genic 2510
NC_003070.9 5629928 5629945 AAC 17 - 5 TGT MYB58 5629655 5631088 - Exon 1143
NC_003070.9 5630442 5630454 AAAATC 12 + 2 TCAAAA MYB58 5629655 5631088 - Exon 634
NC_003070.9 5632112 5632124 AAAGTT 12 - 2 ACTTTA AT1G16489 5629183 5631131 + Intergenic 2929
NC_003070.9 5632267 5632279 AACTT 12 - 2 AAGTT AT1G16489 5629183 5631131 + Intergenic 3084
NC_003070.9 5632424 5632437 AAC 13 + 4 ACA AT1G16489 5629183 5631131 + Intergenic 3241
NC_003070.9 5633448 5633460 ACTCAT 12 + 2 TCATAC AT1G16489 5629183 5631131 + Intergenic 4265
NC_003070.9 5633780 5633808 A 28 - 28 T AT1G16489 5629183 5631131 + Intergenic 4597