MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 826 to 850 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 535273 535285 AACTTC 12 - 2 TTGAAG AT1G02540 534827 535699 - Genic 414
NC_003070.9 535329 535342 AAG 13 - 4 CTT AT1G02540 534827 535699 - Genic 357
NC_003070.9 535576 535588 AAC 12 - 4 GTT AT1G02540 534827 535699 - Genic 111
NC_003070.9 535735 535752 AAAAAT 17 - 2 TTTTTA AT1G02540 534827 535699 - Intergenic -36
NC_003070.9 537360 537372 AAATGT 12 + 2 AAATGT AT1G02550 536483 537211 + Intergenic 877
NC_003070.9 538464 538477 AAGGAC 13 + 2 CAAGGA CLPP5 537740 540127 + Exon 724
NC_003070.9 539464 539476 AATGTC 12 - 2 GACATT CLPP5 537740 540127 + Exon 1724
NC_003070.9 540523 540535 AAAAAT 12 - 2 TATTTT CLPP5 537740 540127 + Intergenic 2783
NC_003070.9 541045 541057 A 12 + 12 A AT1G02570 541236 542245 + Intergenic -179
NC_003070.9 541339 541352 AAG 13 - 4 TTC AT1G02570 541236 542245 + Genic 103
NC_003070.9 542309 542321 A 12 - 12 T AT1G02570 541236 542245 + Intergenic 1073
NC_003070.9 542600 542612 AAAAT 12 - 2 TTATT AT1G02570 541236 542245 + Intergenic 1364
NC_003070.9 544027 544043 AAAAAT 16 - 2 TTTTTA AT1G02575 543011 544057 + Genic 1016
NC_003070.9 544597 544609 AAAATT 12 + 2 AAAATT MEA 544733 549202 + Intergenic -124
NC_003070.9 545122 545136 AGAGG 14 + 2 AGGAG MEA 544733 549202 + Intron 389
NC_003070.9 545368 545380 AAAAT 12 + 2 ATAAA MEA 544733 549202 + Intron 635
NC_003070.9 545398 545411 AAAAAC 13 - 2 TTTTTG MEA 544733 549202 + Intron 665
NC_003070.9 545523 545535 AAATCG 12 + 2 GAAATC MEA 544733 549202 + Intron 790
NC_003070.9 546696 546712 AAAAT 16 - 3 TTTTA MEA 544733 549202 + Intron 1963
NC_003070.9 547176 547189 AAAAAT 13 + 2 AAAAAT MEA 544733 549202 + Intron 2443
NC_003070.9 548239 548251 A 12 - 12 T MEA 544733 549202 + Exon 3506
NC_003070.9 548738 548751 AAACTC 13 + 2 AAACTC MEA 544733 549202 + Intron 4005
NC_003070.9 549839 549852 AAAAT 13 + 2 AAAAT MEA 544733 549202 + Intergenic 5106
NC_003070.9 550015 550029 AAAAT 14 + 2 AAAAT MEA 544733 549202 + Intergenic 5282
NC_003070.9 550197 550211 AAAAT 14 + 2 AAAAT AT1G08805 551002 551636 - Intergenic 1425