MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 876 to 900 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 564957 564969 AAAAAT 12 - 2 TTTTTA BXL2 564018 567771 + Intron 939
NC_003070.9 566019 566032 A 13 - 13 T BXL2 564018 567771 + Intron 2001
NC_003070.9 566167 566179 AAAATT 12 + 2 AAAATT BXL2 564018 567771 + Intron 2149
NC_003070.9 567938 567950 AATAGG 12 - 2 TCCTAT BXL2 564018 567771 + Intergenic 3920
NC_003070.9 568248 568265 AAAAAC 17 + 2 AACAAA AT1G02650 568558 570554 + Intergenic -293
NC_003070.9 569827 569839 AATTC 12 + 2 TTCAA AT1G02650 568558 570554 + Genic 1269
NC_003070.9 570850 570863 A 13 + 13 A AT1G02650 568558 570554 + Intergenic 2292
NC_003070.9 571670 571686 A 16 - 16 T AT1G02660 571826 575085 - Intergenic 3399
NC_003070.9 571810 571832 A 22 - 22 T AT1G02660 571826 575085 - Genic 3253
NC_003070.9 574333 574345 AAGACG 12 - 2 TCGTCT AT1G02660 571826 575085 - Genic 740
NC_003070.9 574372 574386 AAG 14 - 4 TCT AT1G02660 571826 575085 - Genic 699
NC_003070.9 575028 575040 A 12 - 12 T AT1G02660 571826 575085 - Genic 45
NC_003070.9 575063 575080 A 17 - 17 T AT1G02660 571826 575085 - Genic 5
NC_003070.9 575328 575340 AAAATT 12 - 2 TTTAAT AT1G02660 571826 575085 - Intergenic -243
NC_003070.9 575386 575398 AAAATT 12 - 2 TTTAAT AT1G02660 571826 575085 - Intergenic -301
NC_003070.9 576124 576136 ACGGGG 12 + 2 GGACGG AT1G02670 575922 580532 + Genic 202
NC_003070.9 576294 576306 AACCG 12 - 2 TTCGG AT1G02670 575922 580532 + Genic 372
NC_003070.9 576373 576385 A 12 + 12 A AT1G02670 575922 580532 + Genic 451
NC_003070.9 576861 576873 AAG 12 + 4 AAG AT1G02670 575922 580532 + Genic 939
NC_003070.9 576877 576890 ATC 13 - 4 TGA AT1G02670 575922 580532 + Genic 955
NC_003070.9 578938 578951 AACGCT 13 + 2 CGCTAA AT1G02670 575922 580532 + Genic 3016
NC_003070.9 579555 579567 ACT 12 + 4 CTA AT1G02670 575922 580532 + Genic 3633
NC_003070.9 580640 580654 AG 14 + 7 GA TAF13 580625 582310 + Exon 15
NC_003070.9 581067 581082 AAG 15 + 5 AGA TAF13 580625 582310 + Exon 442
NC_003070.9 581564 581576 AAAAAG 12 - 2 CTTTTT TAF13 580625 582310 + Intron 939