MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 926 to 950 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 597666 597678 ACCCAT 12 + 2 CCCATA CSLD5 594502 598657 - Exon 979
NC_003070.9 598600 598616 AAG 16 + 5 GAA CSLD5 594502 598657 - Exon 41
NC_003070.9 598664 598677 AG 13 + 6 AG CSLD5 594502 598657 - Intergenic -7
NC_003070.9 598862 598874 AAAGAG 12 + 2 AAAGAG CSLD5 594502 598657 - Intergenic -205
NC_003070.9 599823 599836 AAAAAC 13 - 2 TTTTGT AT1G02740 599330 602199 - Genic 2363
NC_003070.9 601722 601734 A 12 + 12 A AT1G02740 599330 602199 - Genic 465
NC_003070.9 602839 602851 AACTC 12 - 2 TTGAG AT1G02750 602489 604387 + Genic 350
NC_003070.9 604889 604903 AT 14 + 7 AT AT1G02770 604873 606708 - Genic 1805
NC_003070.9 605044 605057 AT 13 + 6 AT AT1G02770 604873 606708 - Genic 1651
NC_003070.9 605672 605685 AAAAC 13 + 2 AACAA AT1G02770 604873 606708 - Genic 1023
NC_003070.9 605890 605907 AAC 17 + 5 AAC AT1G02770 604873 606708 - Genic 801
NC_003070.9 606228 606240 AGGATC 12 + 2 CAGGAT AT1G02770 604873 606708 - Genic 468
NC_003070.9 606932 606944 AAAAG 12 + 2 AAAAG AT1G02770 604873 606708 - Intergenic -224
NC_003070.9 609242 609254 AAAAGT 12 + 2 TAAAAG emb2386 607799 609534 - Intron 280
NC_003070.9 609512 609524 AAATTT 12 + 2 TTTAAA emb2386 607799 609534 - Exon 10
NC_003070.9 609646 609670 A 24 + 24 A emb2386 607799 609534 - Intergenic -112
NC_003070.9 609780 609792 AAGAT 12 - 2 TTATC emb2386 607799 609534 - Intergenic -246
NC_003070.9 609946 609965 A 19 + 19 A PGA4 610363 612324 - Intergenic 2359
NC_003070.9 609995 610007 AAATAT 12 + 2 AAATAT PGA4 610363 612324 - Intergenic 2317
NC_003070.9 610240 610253 AAACTT 13 - 2 TTTAAG PGA4 610363 612324 - Intergenic 2071
NC_003070.9 610385 610398 AAAG 13 + 3 AGAA PGA4 610363 612324 - Exon 1926
NC_003070.9 612479 612497 A 18 + 18 A PGA4 610363 612324 - Intergenic -155
NC_003070.9 612600 612614 ACACAT 14 - 2 TATGTG PGA4 610363 612324 - Intergenic -276
NC_003070.9 612625 612639 AT 14 + 7 TA PGA4 610363 612324 - Intergenic -301
NC_003070.9 613039 613055 A 16 + 16 A CEL2 613197 616231 - Intergenic 3176