MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 159501 to 159525 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003076.8 20267694 20267706 A 12 + 12 A AT5G49860 20264567 20265334 - Intergenic -2360
NC_003076.8 20268179 20268192 AAACGG 13 + 2 CGGAAA AT5G49870 20270101 20272895 - Intergenic 4703
NC_003076.8 20268802 20268814 AAAAAG 12 + 2 AGAAAA AT5G49870 20270101 20272895 - Intergenic 4081
NC_003076.8 20268924 20268936 AAACAC 12 + 2 AAACAC AT5G49870 20270101 20272895 - Intergenic 3959
NC_003076.8 20270153 20270165 A 12 + 12 A AT5G49870 20270101 20272895 - Genic 2730
NC_003076.8 20274262 20274274 AAATAG 12 + 2 TAGAAA AT5G49870 20270101 20272895 - Intergenic -1367
NC_003076.8 20274283 20274297 AAAAAC 14 - 2 TTGTTT AT5G49870 20270101 20272895 - Intergenic -1388
NC_003076.8 20275893 20275905 AAGAGT 12 - 2 CTCTTA AT5G07485 20275697 20276186 + Genic 196
NC_003076.8 20276843 20276855 AAGAG 12 + 2 GAGAA AT5G07495 20276669 20277046 - Genic 191
NC_003076.8 20276854 20276866 ACAT 12 + 3 ACAT AT5G07495 20276669 20277046 - Genic 180
NC_003076.8 20277165 20277177 AAAAAG 12 - 2 TCTTTT AT5G07495 20276669 20277046 - Intergenic -119
NC_003076.8 20277233 20277245 AGAGAT 12 - 2 TATCTC AT5G07495 20276669 20277046 - Intergenic -187
NC_003076.8 20277329 20277341 AAAATT 12 - 2 TTAATT AT5G07495 20276669 20277046 - Intergenic -283
NC_003076.8 20277811 20277823 AAAATC 12 - 2 ATTTTG AT5G07495 20276669 20277046 - Intergenic -765
NC_003076.8 20278704 20278716 AAAAAT 12 - 2 TATTTT AT5G07495 20276669 20277046 - Intergenic -1658
NC_003076.8 20279928 20279940 AAAAAT 12 - 2 TTTTAT MAD1 20282111 20288084 + Intergenic -2171
NC_003076.8 20279943 20279955 AAATAT 12 - 2 ATATTT MAD1 20282111 20288084 + Intergenic -2156
NC_003076.8 20281729 20281745 AAATT 16 + 3 AATTA MAD1 20282111 20288084 + Intergenic -366
NC_003076.8 20281773 20281785 AAAATC 12 - 2 TTGATT MAD1 20282111 20288084 + Intergenic -326
NC_003076.8 20281832 20281844 AATT 12 + 3 TTAA MAD1 20282111 20288084 + Intergenic -267
NC_003076.8 20282229 20282241 AAATTG 12 - 2 CAATTT MAD1 20282111 20288084 + Exon 118
NC_003076.8 20282420 20282435 AGCAGG 15 - 2 TCCTGC MAD1 20282111 20288084 + Exon 309
NC_003076.8 20282513 20282525 AGAT 12 - 3 CTAT MAD1 20282111 20288084 + Intron 402
NC_003076.8 20282751 20282763 AAAATC 12 - 2 TTTGAT MAD1 20282111 20288084 + Intron 640
NC_003076.8 20283031 20283043 AAATG 12 + 2 AAATG MAD1 20282111 20288084 + Exon 920