MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 159526 to 159550 repeats of 170418

Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003076.8 20284167 20284179 AAAAAC 12 - 2 GTTTTT MAD1 20282111 20288084 + Intron 2056
NC_003076.8 20284312 20284324 ACTCTG 12 - 2 CAGAGT MAD1 20282111 20288084 + Exon 2201
NC_003076.8 20284414 20284426 ACAGG 12 - 2 TGTCC MAD1 20282111 20288084 + Exon 2303
NC_003076.8 20287537 20287549 ACTGAT 12 + 2 ACTGAT MAD1 20282111 20288084 + Intron 5426
NC_003076.8 20287834 20287846 AAACTG 12 + 2 GAAACT MAD1 20282111 20288084 + Exon 5723
NC_003076.8 20288193 20288205 AAAACC 12 + 2 AAAACC CLC-C 20288055 20292432 - Exon 4227
NC_003076.8 20288206 20288218 A 12 + 12 A CLC-C 20288055 20292432 - Exon 4214
NC_003076.8 20288786 20288799 AGATGG 13 - 2 CATCTC CLC-C 20288055 20292432 - Exon 3633
NC_003076.8 20292449 20292461 AAAT 12 + 3 TAAA CLC-C 20288055 20292432 - Intergenic -17
NC_003076.8 20293090 20293106 A 16 - 16 T CLC-C 20288055 20292432 - Intergenic -658
NC_003076.8 20293609 20293623 A 14 - 14 T CLC-C 20288055 20292432 - Intergenic -1177
NC_003076.8 20294548 20294561 AAAAG 13 + 2 AAAAG AT5G49900 20296518 20302575 - Intergenic 8014
NC_003076.8 20296015 20296029 AAAAT 14 + 2 AAAAT AT5G49900 20296518 20302575 - Intergenic 6546
NC_003076.8 20296502 20296517 A 15 - 15 T AT5G49900 20296518 20302575 - Intergenic 6058
NC_003076.8 20296532 20296544 AAACTT 12 + 2 TTAAAC AT5G49900 20296518 20302575 - Genic 6031
NC_003076.8 20296797 20296810 AAAAAT 13 + 2 AAAAAT AT5G49900 20296518 20302575 - Genic 5765
NC_003076.8 20297055 20297069 AAACAT 14 - 2 ATGTTT AT5G49900 20296518 20302575 - Genic 5506
NC_003076.8 20297582 20297594 AAGATC 12 + 2 ATCAAG AT5G49900 20296518 20302575 - Genic 4981
NC_003076.8 20298144 20298156 AGATGC 12 + 2 ATGCAG AT5G49900 20296518 20302575 - Genic 4419
NC_003076.8 20300397 20300409 AAAAAC 12 + 2 AAAAAC AT5G49900 20296518 20302575 - Genic 2166
NC_003076.8 20300419 20300431 AAAGTG 12 + 2 GTGAAA AT5G49900 20296518 20302575 - Genic 2144
NC_003076.8 20301379 20301391 AAAAAG 12 + 2 AAAAAG AT5G49900 20296518 20302575 - Genic 1184
NC_003076.8 20303414 20303428 AAG 14 - 4 TCT cpHsc70-2 20303334 20306469 + Exon 80
NC_003076.8 20306162 20306174 AACCCC 12 + 2 CCAACC cpHsc70-2 20303334 20306469 + Exon 2828
NC_003076.8 20306853 20306872 AACCAC 19 - 3 TTGTGG AT5G49920 20306409 20307943 - Genic 1071