MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 159876 to 159900 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003076.8 20534016 20534032 AATGAC 16 + 2 AATGAC UBC33 20534058 20537138 - Intergenic 3106
NC_003076.8 20534189 20534202 AAATAT 13 - 2 ATTTAT UBC33 20534058 20537138 - Exon 2936
NC_003076.8 20534283 20534296 ACTGAG 13 + 2 ACTGAG UBC33 20534058 20537138 - Exon 2842
NC_003076.8 20534348 20534360 AAATGC 12 - 2 TTGCAT UBC33 20534058 20537138 - Exon 2778
NC_003076.8 20535265 20535277 AAAATG 12 + 2 AATGAA UBC33 20534058 20537138 - Intron 1861
NC_003076.8 20536055 20536067 AACAG 12 + 2 CAGAA UBC33 20534058 20537138 - Intron 1071
NC_003076.8 20536709 20536721 AAAAC 12 + 2 AAACA UBC33 20534058 20537138 - Intron 417
NC_003076.8 20536835 20536849 AAAG 14 + 3 AAGA UBC33 20534058 20537138 - Intron 289
NC_003076.8 20536981 20536993 AGCTCC 12 - 2 GGAGCT UBC33 20534058 20537138 - Exon 145
NC_003076.8 20537175 20537188 AATTAT 13 + 2 TAATTA UBC33 20534058 20537138 - Intergenic -37
NC_003076.8 20537570 20537583 AAAAC 13 + 2 AAACA MEMB12 20537426 20538996 - Exon 1413
NC_003076.8 20538509 20538522 AATATC 13 + 2 ATATCA MEMB12 20537426 20538996 - Exon 474
NC_003076.8 20538883 20538896 AAATTC 13 - 2 GAATTT MEMB12 20537426 20538996 - Exon 100
NC_003076.8 20539282 20539294 AAAAT 12 + 2 ATAAA MEMB12 20537426 20538996 - Intergenic -286
NC_003076.8 20539307 20539321 AAAAG 14 + 2 AAAAG MEMB12 20537426 20538996 - Intergenic -311
NC_003076.8 20539459 20539471 AAAT 12 + 3 AAAT MEMB12 20537426 20538996 - Intergenic -463
NC_003076.8 20539701 20539733 AT 32 + 16 TA AT5G50443 20540335 20541211 + Intergenic -602
NC_003076.8 20539805 20539817 ACT 12 - 4 TAG AT5G50443 20540335 20541211 + Intergenic -518
NC_003076.8 20539978 20539990 AAACTC 12 + 2 AAACTC AT5G50443 20540335 20541211 + Intergenic -345
NC_003076.8 20540106 20540118 AAAAAT 12 + 2 AAAAAT AT5G50443 20540335 20541211 + Intergenic -217
NC_003076.8 20540863 20540875 ACATC 12 + 2 ATCAC AT5G50443 20540335 20541211 + Genic 528
NC_003076.8 20541017 20541029 AAAAG 12 - 2 TTTTC AT5G50443 20540335 20541211 + Genic 682
NC_003076.8 20542039 20542059 A 20 + 20 A AT5G50443 20540335 20541211 + Intergenic 1704
NC_003076.8 20542799 20542811 AACCG 12 - 2 GTTCG AT5G50450 20543225 20544857 - Intergenic 2046
NC_003076.8 20542883 20542895 AAGGCC 12 - 2 GCCTTG AT5G50450 20543225 20544857 - Intergenic 1962