MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 159926 to 159950 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003076.8 20552545 20552559 AAATTG 14 + 2 AAATTG AT5G50460 20551132 20552670 - Genic 111
NC_003076.8 20555036 20555053 AAC 17 + 5 AAC MIR5015 20554881 20555053 - Exon 0
NC_003076.8 20555638 20555650 AGCGGC 12 + 2 CGGCAG NF-YC7 20555120 20555758 - Exon 108
NC_003076.8 20555658 20555670 AACGGC 12 + 2 ACGGCA NF-YC7 20555120 20555758 - Exon 88
NC_003076.8 20558440 20558455 AAC 15 - 5 GTT NF-YC6 20557574 20558487 - Exon 32
NC_003076.8 20558628 20558640 AATTAT 12 + 2 ATAATT NF-YC6 20557574 20558487 - Intergenic -141
NC_003076.8 20558661 20558673 AAT 12 - 4 TTA NF-YC6 20557574 20558487 - Intergenic -174
NC_003076.8 20559447 20559459 AAATT 12 - 2 ATTTA NF-YC6 20557574 20558487 - Intergenic -960
NC_003076.8 20559521 20559533 AATT 12 + 3 TTAA NF-YC5 20560434 20561228 - Intergenic 1695
NC_003076.8 20559887 20559901 AAAAAC 14 + 2 AAAAAC NF-YC5 20560434 20561228 - Intergenic 1327
NC_003076.8 20559960 20559977 AAAAAC 17 + 2 AAAAAC NF-YC5 20560434 20561228 - Intergenic 1251
NC_003076.8 20560481 20560493 A 12 - 12 T NF-YC5 20560434 20561228 - Exon 735
NC_003076.8 20561149 20561164 AAC 15 - 5 GTT NF-YC5 20560434 20561228 - Exon 64
NC_003076.8 20561878 20561890 AAATTT 12 + 2 TTAAAT AT5G50500 20562150 20562557 - Intergenic 667
NC_003076.8 20562867 20562879 AAGGAG 12 - 2 CTTCTC AT5G50500 20562150 20562557 - Intergenic -310
NC_003076.8 20562971 20562983 AAAATC 12 - 2 TTTTGA AT5G50500 20562150 20562557 - Intergenic -414
NC_003076.8 20563467 20563479 AAAATT 12 - 2 AATTTT AT5G07665 20563579 20563784 - Intergenic 305
NC_003076.8 20563582 20563595 AAATGG 13 + 2 AAATGG AT5G07665 20563579 20563784 - Genic 189
NC_003076.8 20564675 20564687 AACAT 12 - 2 GTTAT AT5G07695 20563618 20564100 + Intergenic 1057
NC_003076.8 20565217 20565234 AAAAAT 17 - 2 ATTTTT AT5G00630 20565548 20566491 - Intergenic 1257
NC_003076.8 20565562 20565576 AAT 14 - 4 TTA AT5G00630 20565548 20566491 - Genic 915
NC_003076.8 20566056 20566072 ATC 16 - 5 ATG AT5G00630 20565548 20566491 - Genic 419
NC_003076.8 20566190 20566202 AAAAAG 12 + 2 AAAAGA AT5G00630 20565548 20566491 - Genic 289
NC_003076.8 20566864 20566888 A 24 - 24 T AT5G00630 20565548 20566491 - Intergenic -373
NC_003076.8 20566917 20566929 AAAAC 12 + 2 AAAAC AT5G00630 20565548 20566491 - Intergenic -426