MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 159976 to 160000 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003076.8 20583117 20583129 AACT 12 + 3 AACT SPL13A 20582083 20584721 - Intron 1592
NC_003076.8 20583959 20583973 AACTTC 14 + 2 AACTTC SPL13A 20582083 20584721 - Exon 748
NC_003076.8 20584936 20584949 ATC 13 - 4 ATG SPL13A 20582083 20584721 - Intergenic -215
NC_003076.8 20584945 20584957 AAAATG 12 + 2 ATGAAA SPL13A 20582083 20584721 - Intergenic -224
NC_003076.8 20588842 20588854 AAG 12 - 4 CTT HSD4 20587936 20589490 + Intron 906
NC_003076.8 20588849 20588861 AAAAAG 12 - 2 TTCTTT HSD4 20587936 20589490 + Intron 913
NC_003076.8 20589383 20589397 A 14 - 14 T HSD4 20587936 20589490 + Exon 1447
NC_003076.8 20589461 20589473 AAAAT 12 + 2 AAAAT HSD4 20587936 20589490 + Exon 1525
NC_003076.8 20589815 20589827 AAAAAC 12 + 2 AACAAA HSD1 20589702 20591937 - Exon 2110
NC_003076.8 20590925 20590937 ACTATC 12 - 2 AGTGAT HSD1 20589702 20591937 - Intron 1000
NC_003076.8 20591870 20591882 AAG 12 - 4 CTT HSD1 20589702 20591937 - Exon 55
NC_003076.8 20592436 20592448 AATT 12 + 3 ATTA HSD1 20589702 20591937 - Intergenic -499
NC_003076.8 20592571 20592583 AAGAT 12 - 2 TATCT HSD1 20589702 20591937 - Intergenic -634
NC_003076.8 20593150 20593163 AAATAT 13 - 2 TTTATA AT5G50610 20593600 20594379 + Intergenic -437
NC_003076.8 20594458 20594473 A 15 + 15 A AT5G50610 20593600 20594379 + Intergenic 858
NC_003076.8 20594524 20594544 AACTC 20 + 4 TCAAC AT5G50610 20593600 20594379 + Intergenic 924
NC_003076.8 20595110 20595128 AAG 18 - 6 TTC AT5G50610 20593600 20594379 + Intergenic 1510
NC_003076.8 20595872 20595887 AAATAT 15 + 2 ATAAAT AT5G50610 20593600 20594379 + Intergenic 2272
NC_003076.8 20596180 20596192 AAAAAT 12 - 2 ATTTTT AT5G50610 20593600 20594379 + Intergenic 2580
NC_003076.8 20596435 20596449 AAAGAG 14 - 2 TTCTCT AT5G50610 20593600 20594379 + Intergenic 2835
NC_003076.8 20596450 20596464 AAGGAG 14 - 2 TCCTTC AT5G50610 20593600 20594379 + Intergenic 2850
NC_003076.8 20596471 20596484 AAGAGG 13 - 2 TCCTCT AT5G50610 20593600 20594379 + Intergenic 2871
NC_003076.8 20596877 20596889 AAAAGG 12 + 2 GGAAAA AT5G00635 20598888 20599831 - Intergenic 2942
NC_003076.8 20598015 20598027 AACAT 12 - 2 GTTAT AT5G00635 20598888 20599831 - Intergenic 1804
NC_003076.8 20598557 20598574 AAAAAT 17 - 2 ATTTTT AT5G00635 20598888 20599831 - Intergenic 1257