MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 1726 to 1750 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 1174841 1174863 AAAAAG 22 + 3 AAAAAG ERF14 1175033 1175768 + Intergenic -170
NC_003070.9 1175048 1175061 A 13 + 13 A ERF14 1175033 1175768 + Exon 15
NC_003070.9 1175158 1175171 ACACAT 13 + 2 ATACAC ERF14 1175033 1175768 + Exon 125
NC_003070.9 1175206 1175219 AGG 13 + 4 GGA ERF14 1175033 1175768 + Exon 173
NC_003070.9 1175476 1175489 AAACTC 13 - 2 TTTGAG ERF14 1175033 1175768 + Exon 443
NC_003070.9 1175635 1175649 AAAAT 14 + 2 AAATA ERF14 1175033 1175768 + Exon 602
NC_003070.9 1176246 1176259 AGATG 13 + 2 AGATG AT1G04380 1176544 1178488 - Intergenic 2229
NC_003070.9 1176419 1176434 AAAATT 15 + 2 AATTAA AT1G04380 1176544 1178488 - Intergenic 2054
NC_003070.9 1176973 1176987 AC 14 + 7 AC AT1G04380 1176544 1178488 - Genic 1501
NC_003070.9 1177023 1177035 AACTGC 12 - 2 TTGCAG AT1G04380 1176544 1178488 - Genic 1453
NC_003070.9 1178931 1178944 AAAAAG 13 - 2 TTTTCT AT1G04257 1178925 1179176 + Genic 6
NC_003070.9 1183209 1183225 A 16 + 16 A AT1G04390 1179310 1183704 - Genic 479
NC_003070.9 1183395 1183407 AAGTGG 12 - 2 CACTTC AT1G04390 1179310 1183704 - Genic 297
NC_003070.9 1184190 1184203 AATG 13 + 3 AATG AT1G04390 1179310 1183704 - Intergenic -486
NC_003070.9 1184585 1184600 AAAAAG 15 - 2 TTTCTT AT1G04390 1179310 1183704 - Intergenic -881
NC_003070.9 1185162 1185176 AT 14 + 7 TA CRY2 1185512 1188696 - Intergenic 3520
NC_003070.9 1185218 1185232 AAATT 14 - 2 TAATT CRY2 1185512 1188696 - Intergenic 3464
NC_003070.9 1185475 1185487 AAAAG 12 - 2 TTTCT CRY2 1185512 1188696 - Intergenic 3209
NC_003070.9 1185836 1185850 AAG 14 + 4 GAA CRY2 1185512 1188696 - Exon 2846
NC_003070.9 1186348 1186360 AAACC 12 + 2 AACCA CRY2 1185512 1188696 - Intron 2336
NC_003070.9 1186368 1186382 AAAAT 14 + 2 AAAAT CRY2 1185512 1188696 - Intron 2314
NC_003070.9 1188008 1188020 AACAAT 12 + 2 ATAACA CRY2 1185512 1188696 - Exon 676
NC_003070.9 1188106 1188119 AATCCT 13 + 2 TAATCC CRY2 1185512 1188696 - Intron 577
NC_003070.9 1188984 1188996 AAAATT 12 + 2 TAAAAT c-NAD-MDH1 1188995 1191458 - Exon 2462
NC_003070.9 1189029 1189041 AAAACC 12 - 2 TTTGGT c-NAD-MDH1 1188995 1191458 - Exon 2417