MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 1776 to 1800 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 1217733 1217745 AAAG 12 - 3 TTTC AT1G04490 1217690 1220899 - Genic 3154
NC_003070.9 1217828 1217840 AAGCAG 12 - 2 TCTGCT AT1G04490 1217690 1220899 - Genic 3059
NC_003070.9 1217979 1217991 AAT 12 - 4 TTA AT1G04490 1217690 1220899 - Genic 2908
NC_003070.9 1220029 1220041 AAAATC 12 - 2 ATTTTG AT1G04490 1217690 1220899 - Genic 858
NC_003070.9 1221954 1221970 ATC 16 + 5 CAT AT1G04500 1221411 1224539 - Genic 2569
NC_003070.9 1222336 1222349 AACCAG 13 - 2 TGGTTC AT1G04500 1221411 1224539 - Genic 2190
NC_003070.9 1222982 1222994 AACGAC 12 - 2 CGTTGT AT1G04500 1221411 1224539 - Genic 1545
NC_003070.9 1223893 1223905 AAACAG 12 + 2 CAGAAA AT1G04500 1221411 1224539 - Genic 634
NC_003070.9 1224424 1224436 AACAG 12 + 2 AACAG AT1G04500 1221411 1224539 - Genic 103
NC_003070.9 1225512 1225524 AATT 12 + 3 ATTA MAC3A 1226483 1230947 + Intergenic -959
NC_003070.9 1226383 1226395 AAAAG 12 + 2 AAAAG MAC3A 1226483 1230947 + Intergenic -88
NC_003070.9 1226720 1226733 AAG 13 - 4 CTT MAC3A 1226483 1230947 + Exon 237
NC_003070.9 1226946 1226960 AAAAG 14 - 2 TTCTT MAC3A 1226483 1230947 + Intron 463
NC_003070.9 1229692 1229704 AGAGAT 12 - 2 ATCTCT MAC3A 1226483 1230947 + Intron 3209
NC_003070.9 1231136 1231154 A 18 - 18 T MAC3A 1226483 1230947 + Intergenic 4653
NC_003070.9 1231550 1231571 AG 21 - 10 CT PDLP2 1231452 1234032 + Exon 98
NC_003070.9 1231598 1231619 AAAGCC 21 + 3 AAAGCC PDLP2 1231452 1234032 + Exon 146
NC_003070.9 1232404 1232419 AAAACC 15 - 2 TTTTGG PDLP2 1231452 1234032 + Intron 952
NC_003070.9 1232469 1232482 AATTC 13 - 2 TTGAA PDLP2 1231452 1234032 + Intron 1017
NC_003070.9 1232918 1232932 AAG 14 - 4 TCT PDLP2 1231452 1234032 + Exon 1466
NC_003070.9 1232995 1233007 AAATCG 12 - 2 GATTTC PDLP2 1231452 1234032 + Intron 1543
NC_003070.9 1233689 1233701 ACATGC 12 + 2 CACATG PDLP2 1231452 1234032 + Intron 2237
NC_003070.9 1233908 1233921 AATAT 13 - 2 TATTA PDLP2 1231452 1234032 + Exon 2456
NC_003070.9 1234292 1234304 AAAAAC 12 + 2 AAAAAC TPR4 1234176 1236206 - Exon 1902
NC_003070.9 1235048 1235062 ATC 14 + 4 TCA TPR4 1234176 1236206 - Exon 1144