MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 1801 to 1825 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 1238959 1238973 ACC 14 - 4 GGT AT1G04540 1236754 1239199 + Genic 2205
NC_003070.9 1240063 1240075 AAAAG 12 + 2 AAGAA IAA12 1240294 1242157 + Intergenic -219
NC_003070.9 1240119 1240131 AACAGC 12 + 2 GCAACA IAA12 1240294 1242157 + Intergenic -163
NC_003070.9 1240394 1240410 AG 16 - 8 CT IAA12 1240294 1242157 + Exon 100
NC_003070.9 1240917 1240929 AAGCAC 12 - 2 GCTTGT IAA12 1240294 1242157 + Intron 623
NC_003070.9 1242815 1242829 AAGAGG 14 - 2 TCTTCC AT1G04555 1242506 1244244 + Genic 309
NC_003070.9 1242862 1242880 AAG 18 - 6 TCT AT1G04555 1242506 1244244 + Genic 356
NC_003070.9 1243266 1243304 A 38 - 38 T AT1G04555 1242506 1244244 + Genic 760
NC_003070.9 1244064 1244078 AAAAG 14 + 2 GAAAA AT1G04555 1242506 1244244 + Genic 1558
NC_003070.9 1245210 1245223 AAAGAG 13 - 2 TTTCTC AT1G04560 1244947 1246059 + Genic 263
NC_003070.9 1245815 1245832 ACCATG 17 - 2 TCATGG AT1G04560 1244947 1246059 + Genic 868
NC_003070.9 1246518 1246530 AACCAC 12 - 2 TTGTGG AT1G04570 1246601 1248876 - Intergenic 2346
NC_003070.9 1248404 1248418 AAGGAG 14 - 2 TTCTCC AT1G04570 1246601 1248876 - Genic 458
NC_003070.9 1248498 1248513 AAC 15 - 5 TTG AT1G04570 1246601 1248876 - Genic 363
NC_003070.9 1249543 1249555 AAATC 12 - 2 TTTGA AT1G08855 1249571 1251697 - Intergenic 2142
NC_003070.9 1249625 1249637 AAAAG 12 + 2 AAGAA AT1G08855 1249571 1251697 - Genic 2060
NC_003070.9 1250358 1250374 AAAAAT 16 + 2 AAAAAT AT1G08855 1249571 1251697 - Genic 1323
NC_003070.9 1250365 1250379 AAAAT 14 + 2 AAAAT AT1G08855 1249571 1251697 - Genic 1318
NC_003070.9 1250401 1250415 AAAAT 14 + 2 AAAAT AT1G08855 1249571 1251697 - Genic 1282
NC_003070.9 1251681 1251699 AAG 18 + 6 AAG AT1G08855 1249571 1251697 - Genic -2
NC_003070.9 1252498 1252512 AG 14 + 7 AG AO4 1252005 1257893 - Intron 5381
NC_003070.9 1252939 1252953 AT 14 + 7 AT AO4 1252005 1257893 - Intron 4940
NC_003070.9 1254519 1254531 AAAGAG 12 + 2 AGAGAA AO4 1252005 1257893 - Intron 3362
NC_003070.9 1256122 1256135 AAATTG 13 - 2 CAATTT AO4 1252005 1257893 - Exon 1758
NC_003070.9 1257084 1257096 AAAACC 12 + 2 CAAAAC AO4 1252005 1257893 - Intron 797