MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 1851 to 1875 repeats of 170418

Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 1281003 1281016 AAATAG 13 + 2 TAGAAA YUC3 1279351 1281618 + Intron 1652
NC_003070.9 1281493 1281505 AAAAAT 12 - 2 TATTTT YUC3 1279351 1281618 + Exon 2142
NC_003070.9 1282052 1282070 ACAGAT 18 + 3 ACAGAT HCAR 1282163 1286619 - Intergenic 4549
NC_003070.9 1282313 1282326 AGAGC 13 + 2 GAGCA HCAR 1282163 1286619 - Exon 4293
NC_003070.9 1282415 1282437 ACTC 22 - 5 AGTG HCAR 1282163 1286619 - Exon 4182
NC_003070.9 1285403 1285415 AAGCT 12 + 2 AAGCT HCAR 1282163 1286619 - Intron 1204
NC_003070.9 1285861 1285880 AAAC 19 + 4 AAAC HCAR 1282163 1286619 - Intron 739
NC_003070.9 1286525 1286538 AAGAG 13 + 2 AGAAG HCAR 1282163 1286619 - Exon 81
NC_003070.9 1286762 1286777 AAAAT 15 + 3 AAAAT HCAR 1282163 1286619 - Intergenic -143
NC_003070.9 1287712 1287727 AAG 15 - 5 CTT AT1G04625 1287831 1289820 - Intergenic 2093
NC_003070.9 1288152 1288165 A 13 - 13 T AT1G04625 1287831 1289820 - Genic 1655
NC_003070.9 1288967 1288979 AAAACT 12 + 2 AAAACT AT1G04625 1287831 1289820 - Genic 841
NC_003070.9 1289155 1289167 AAAAG 12 - 2 TTTTC AT1G04625 1287831 1289820 - Genic 653
NC_003070.9 1289336 1289349 AAAAAT 13 - 2 TTATTT AT1G04625 1287831 1289820 - Genic 471
NC_003070.9 1289340 1289354 AAAAT 14 - 2 TTTTA AT1G04625 1287831 1289820 - Genic 466
NC_003070.9 1289386 1289398 AAAAAG 12 - 2 CTTTTT AT1G04625 1287831 1289820 - Genic 422
NC_003070.9 1289575 1289587 AAAATG 12 - 2 TTTTCA AT1G04625 1287831 1289820 - Genic 233
NC_003070.9 1289883 1289896 ATC 13 + 4 TCA MEE4 1289734 1291112 - Exon 1216
NC_003070.9 1291250 1291266 AAG 16 - 5 TCT EMB1687 1291300 1292024 + Intergenic -34
NC_003070.9 1293792 1293804 AAATTC 12 - 2 TTGAAT AT1G04645 1293770 1294263 - Genic 459
NC_003070.9 1293802 1293828 AT 26 + 13 AT AT1G04645 1293770 1294263 - Genic 435
NC_003070.9 1294204 1294216 AAG 12 + 4 AAG AT1G04645 1293770 1294263 - Genic 47
NC_003070.9 1294353 1294365 AAAC 12 + 3 CAAA AT1G04645 1293770 1294263 - Intergenic -90
NC_003070.9 1294448 1294460 AAAAT 12 + 2 AAAAT AT1G04650 1294627 1299023 - Intergenic 4563
NC_003070.9 1297678 1297690 AAAGAT 12 + 2 AAAGAT AT1G04650 1294627 1299023 - Genic 1333