MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 1826 to 1850 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 1257360 1257372 AC 12 - 6 GT AO4 1252005 1257893 - Intron 521
NC_003070.9 1258570 1258582 ACATCT 12 - 2 AGATGT AT1G04590 1258556 1261470 - Genic 2888
NC_003070.9 1259031 1259043 AAG 12 - 4 TTC AT1G04590 1258556 1261470 - Genic 2427
NC_003070.9 1262210 1262222 AAAATT 12 - 2 AATTTT XIA 1261762 1272588 + Intron 448
NC_003070.9 1262445 1262458 AAAG 13 + 3 AGAA XIA 1261762 1272588 + Intron 683
NC_003070.9 1265220 1265232 ACACTG 12 + 2 GACACT XIA 1261762 1272588 + Intron 3458
NC_003070.9 1266478 1266493 AAACT 15 - 3 TTAGT XIA 1261762 1272588 + Intron 4716
NC_003070.9 1267252 1267264 AAGAG 12 + 2 AGAAG XIA 1261762 1272588 + Exon 5490
NC_003070.9 1267605 1267617 AACTTC 12 - 2 GTTGAA XIA 1261762 1272588 + Intron 5843
NC_003070.9 1273939 1273951 AAAT 12 + 3 TAAA XIA 1261762 1272588 + Intergenic 12177
NC_003070.9 1274898 1274910 ACAGTC 12 + 2 AGTCAC XIA 1261762 1272588 + Intergenic 13136
NC_003070.9 1275269 1275281 AAAAAC 12 + 2 CAAAAA XIA 1261762 1272588 + Intergenic 13507
NC_003070.9 1275418 1275430 AAAAAT 12 + 2 AAAATA XIA 1261762 1272588 + Intergenic 13656
NC_003070.9 1275698 1275710 AATTCC 12 + 2 AATTCC XIA 1261762 1272588 + Intergenic 13936
NC_003070.9 1275719 1275731 ACATC 12 - 2 ATGTG XIA 1261762 1272588 + Intergenic 13957
NC_003070.9 1275820 1275832 AAAAAC 12 - 2 GTTTTT XIA 1261762 1272588 + Intergenic 14058
NC_003070.9 1276140 1276153 AAC 13 - 4 TGT YUC3 1279351 1281618 + Intergenic -3198
NC_003070.9 1276865 1276877 ATATC 12 - 2 ATATG YUC3 1279351 1281618 + Intergenic -2474
NC_003070.9 1278165 1278179 AAAAT 14 - 2 TTTTA YUC3 1279351 1281618 + Intergenic -1172
NC_003070.9 1278170 1278186 AAAAAT 16 - 2 TTTTAT YUC3 1279351 1281618 + Intergenic -1165
NC_003070.9 1279216 1279228 A 12 + 12 A YUC3 1279351 1281618 + Intergenic -123
NC_003070.9 1279295 1279307 AAT 12 + 4 ATA YUC3 1279351 1281618 + Intergenic -44
NC_003070.9 1280260 1280275 A 15 + 15 A YUC3 1279351 1281618 + Intron 909
NC_003070.9 1280319 1280331 AAACAG 12 - 2 TCTGTT YUC3 1279351 1281618 + Intron 968
NC_003070.9 1280672 1280685 AAAGGC 13 + 2 GGCAAA YUC3 1279351 1281618 + Exon 1321