MSDB
Showing repeats of Arabidopsis thaliana (Mouse-ear cress)

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Showing 1976 to 2000 repeats of 170418

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Chromosome Start Stop Repeat Class Repeat Length Strand # Units Actual Repeat Gene Name Gene Start Gene Stop Gene Strand Annotation Distance from TSS
NC_003070.9 1370351 1370363 AAGATG 12 + 2 ATGAAG UBP2 1369036 1373103 - Exon 2740
NC_003070.9 1372593 1372609 AAATC 16 + 3 AAATC UBP2 1369036 1373103 - Intron 494
NC_003070.9 1372797 1372809 AAAAGC 12 + 2 AAAGCA UBP2 1369036 1373103 - Intron 294
NC_003070.9 1372829 1372842 AAG 13 + 4 AGA UBP2 1369036 1373103 - Exon 261
NC_003070.9 1372946 1372958 AGAT 12 + 3 AGAT UBP2 1369036 1373103 - Exon 145
NC_003070.9 1372966 1372979 AAGC 13 - 3 TGCT UBP2 1369036 1373103 - Exon 124
NC_003070.9 1373474 1373487 AATC 13 + 3 AATC PRMT10 1373234 1375821 - Exon 2334
NC_003070.9 1375750 1375764 AATC 14 + 3 AATC PRMT10 1373234 1375821 - Exon 57
NC_003070.9 1376962 1376974 AACTGT 12 - 2 GTTACA AT1G04880 1375824 1379228 - Genic 2254
NC_003070.9 1378734 1378746 AG 12 - 6 TC AT1G04880 1375824 1379228 - Genic 482
NC_003070.9 1379223 1379237 AATG 14 + 3 ATGA AT1G04880 1375824 1379228 - Genic 5
NC_003070.9 1379802 1379814 AAAAAG 12 - 2 CTTTTT AT1G04890 1380382 1382599 - Intergenic 2785
NC_003070.9 1379884 1379900 AAAT 16 + 4 AAAT AT1G04890 1380382 1382599 - Intergenic 2699
NC_003070.9 1379999 1380011 AT 12 + 6 AT AT1G04890 1380382 1382599 - Intergenic 2588
NC_003070.9 1381740 1381752 AAAAC 12 - 2 TTTGT AT1G04890 1380382 1382599 - Genic 847
NC_003070.9 1381998 1382010 ATCGCC 12 + 2 CATCGC AT1G04890 1380382 1382599 - Genic 589
NC_003070.9 1383542 1383554 AAAACT 12 - 2 AGTTTT AT1G04895 1383008 1383422 - Intergenic -120
NC_003070.9 1383885 1383897 AGAGAT 12 + 2 TAGAGA AT1G04900 1383841 1387895 + Genic 44
NC_003070.9 1384948 1384960 AAAAC 12 + 2 ACAAA AT1G04900 1383841 1387895 + Genic 1107
NC_003070.9 1385880 1385892 AATAT 12 + 2 ATAAT AT1G04297 1385478 1386132 - Genic 240
NC_003070.9 1386992 1387004 AATTAT 12 + 2 TATAAT AT1G04900 1383841 1387895 + Genic 3151
NC_003070.9 1387008 1387020 AAATAC 12 - 2 TATTTG AT1G04900 1383841 1387895 + Genic 3167
NC_003070.9 1387784 1387796 AATGT 12 + 2 TGTAA AT1G04900 1383841 1387895 + Genic 3943
NC_003070.9 1389097 1389110 AACAAG 13 + 2 AACAAG AT1G04303 1388988 1389225 + Genic 109
NC_003070.9 1391530 1391542 AAAAT 12 - 2 ATTTT SPS3F 1391434 1395953 - Exon 4411