Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2476 to 2500 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
4775031
4775044
AACTCC
13
-
2
GTTGGA
ispH
4774768
4775718
-
Genic
674
NZ_CP028592.1
4776706
4776718
ACAGCC
12
+
2
CAGCCA
C9E72_RS24795
4776257
4776751
-
Genic
33
NZ_CP028592.1
4776769
4776781
ACCGTC
12
+
2
TCACCG
ileS
4776751
4779567
-
Genic
2786
NZ_CP028592.1
4780392
4780405
ACCATC
13
+
2
CATCAC
ribF
4779610
4780551
-
Genic
146
NZ_CP028592.1
4780411
4780423
AAGCGC
12
-
2
TTGCGC
ribF
4779610
4780551
-
Genic
128
NZ_CP028592.1
4780652
4780665
ACCATG
13
-
2
GTCATG
C9E72_RS24810
4780559
4780783
-
Genic
118
NZ_CP028592.1
4781576
4781589
AAATT
13
+
2
TAAAT
espX1
4781619
4783040
+
Intergenic
-30
NZ_CP028592.1
4782519
4782532
AATATT
13
+
2
TTAATA
espX1
4781619
4783040
+
Genic
900
NZ_CP028592.1
4786741
4786754
AAAGTG
13
+
2
AGTGAA
C9E72_RS24835
4784621
4787071
+
Genic
2120
NZ_CP028592.1
4787506
4787518
AAAAGG
12
-
2
TCCTTT
C9E72_RS24835
4784621
4787071
+
Intergenic
2885
NZ_CP028592.1
4787579
4787593
AAAATT
14
-
2
TTTAAT
nhaR
4788082
4788987
-
Intergenic
1394
NZ_CP028592.1
4791435
4791450
AACCTG
15
+
2
AACCTG
dnaJ
4791055
4792185
-
Genic
735
NZ_CP028592.1
4791572
4791587
ACCATG
15
+
2
GACCAT
dnaJ
4791055
4792185
-
Genic
598
NZ_CP028592.1
4795728
4795740
AAAATG
12
-
2
ATTTTC
msyB
4794997
4795710
+
Intergenic
731
NZ_CP028592.1
4799233
4799250
AGCGGC
17
+
2
GCGGCA
C9E72_RS24895
4798394
4799824
+
Genic
839
NZ_CP028592.1
4800189
4800201
AAATCG
12
-
2
CGATTT
yaaA
4799894
4800670
+
Genic
295
NZ_CP028592.1
4802763
4802776
AGCCGG
13
+
2
GCCGGA
thrB
4802620
4803552
-
Genic
776
NZ_CP028592.1
4803910
4803922
AAATTG
12
-
2
TTCAAT
thrA
4803554
4806016
-
Genic
2094
NZ_CP028592.1
4805919
4805931
AGGGGC
12
-
2
CCTGCC
thrA
4803554
4806016
-
Genic
85
NZ_CP028592.1
4806116
4806132
AATGGT
16
+
2
TGGTAA
C9E72_RS24925
4806097
4806180
-
Genic
48
NZ_CP028592.1
4806127
4806139
ACCATC
12
-
2
ATGGTG
C9E72_RS24925
4806097
4806180
-
Genic
41
NZ_CP028592.1
4806506
4806518
ACTGCC
12
+
2
CTGCCA
C9E72_RS24930
4806394
4807080
-
Genic
562
NZ_CP028592.1
4811271
4811285
ACCGCC
14
+
2
CCGCCA
creC
4809902
4811326
-
Genic
41
NZ_CP028592.1
4816195
4816207
AAGCTG
12
-
2
GCTTCA
sltY
4815352
4817289
-
Genic
1082
NZ_CP028592.1
4816252
4816264
AAAGAG
12
-
2
TCTTTC
sltY
4815352
4817289
-
Genic
1025