Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2501 to 2525 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
4817389
4817402
AAAAGT
13
-
2
TTTTAC
ettA
4817500
4819167
+
Intergenic
-98
NZ_CP028592.1
4818788
4818800
AAAGTT
12
-
2
CTTTAA
ettA
4817500
4819167
+
Genic
1288
NZ_CP028592.1
4822030
4822042
ACTGC
12
+
2
GCACT
radA
4820728
4822110
-
Genic
68
NZ_CP028592.1
4823846
4823858
AAGAGG
12
+
2
GGAAGA
lplA
4823905
4824921
+
Intergenic
-47
NZ_CP028592.1
4830170
4830182
AGCTCC
12
-
2
GCTGGA
deoC
4828877
4829656
-
Intergenic
-514
NZ_CP028592.1
4835082
4835095
AGGCCC
13
-
2
GGCCTG
osmY
4834774
4835379
-
Genic
284
NZ_CP028592.1
4836418
4836430
ACCGCG
12
-
2
CGCGGT
prfC
4835772
4837361
-
Genic
931
NZ_CP028592.1
4836661
4836674
AACTGG
13
-
2
CCAGTT
prfC
4835772
4837361
-
Genic
687
NZ_CP028592.1
4837173
4837185
AGATGG
12
-
2
TCCATC
prfC
4835772
4837361
-
Genic
176
NZ_CP028592.1
4839346
4839358
AACTGG
12
-
2
CCAGTT
rsmC
4839075
4840106
+
Genic
271
NZ_CP028592.1
4839933
4839946
ACCGC
13
-
2
GCGGT
rsmC
4839075
4840106
+
Genic
858
NZ_CP028592.1
4840674
4840686
AATGAT
12
+
2
TGATAA
C9E72_RS25105
4840421
4840657
-
Intergenic
-17
NZ_CP028592.1
4840767
4840779
AATGAT
12
-
2
ATCATT
fhuF
4840798
4841586
+
Intergenic
-19
NZ_CP028592.1
4841033
4841045
AACC
12
+
3
CAAC
fhuF
4840798
4841586
+
Genic
235
NZ_CP028592.1
4841880
4841892
ACCG
12
-
3
GTCG
bglJ
4841624
4842301
-
Genic
409
NZ_CP028592.1
4842109
4842122
AAAAAG
13
+
2
AGAAAA
bglJ
4841624
4842301
-
Genic
179
NZ_CP028592.1
4850507
4850521
AAAATG
14
+
2
AATGAA
C9E72_RS25155
4849450
4850472
-
Intergenic
-35
NZ_CP028592.1
4852754
4852766
AACAG
12
-
2
TGTTC
C9E72_RS25165
4851740
4853101
+
Genic
1014
NZ_CP028592.1
4853178
4853190
ACTGCC
12
+
2
CTGCCA
C9E72_RS25170
4853150
4854814
-
Genic
1624
NZ_CP028592.1
4853321
4853334
AGCGGC
13
+
2
GCGGCA
C9E72_RS25170
4853150
4854814
-
Genic
1480
NZ_CP028592.1
4853424
4853437
AAGCAG
13
+
2
CAGAAG
C9E72_RS25170
4853150
4854814
-
Genic
1377
NZ_CP028592.1
4854953
4854965
AAAAG
12
-
2
TTTTC
C9E72_RS25175
4855043
4855585
+
Intergenic
-78
NZ_CP028592.1
4855815
4855827
AACGC
12
+
2
AACGC
btsT
4855878
4858028
+
Intergenic
-51
NZ_CP028592.1
4860103
4860115
AATAGC
12
+
2
ATAGCA
C9E72_RS25195
4859317
4860675
-
Genic
560
NZ_CP028592.1
4862110
4862122
ACGATC
12
-
2
TGATCG
C9E72_RS25205
4861246
4863678
+
Genic
864