Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2526 to 2550 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
4864150
4864162
AGCGCC
12
+
2
CCAGCG
C9E72_RS25210
4863745
4865214
+
Genic
405
NZ_CP028592.1
4866312
4866324
AAAAAC
12
+
2
AAAAAC
C9E72_RS25215
4865214
4866968
+
Genic
1098
NZ_CP028592.1
4866542
4866554
AAAAAG
12
+
2
GAAAAA
C9E72_RS25215
4865214
4866968
+
Genic
1328
NZ_CP028592.1
4867155
4867167
AATCAC
12
+
2
AATCAC
symE
4867189
4867530
+
Intergenic
-22
NZ_CP028592.1
4867408
4867420
CCG
12
+
4
CCG
symE
4867189
4867530
+
Genic
219
NZ_CP028592.1
4870218
4870230
AGCATC
12
+
2
TCAGCA
C9E72_RS25240
4870107
4871519
+
Genic
111
NZ_CP028592.1
4871518
4871530
AATTAG
12
+
2
AATTAG
C9E72_RS25240
4870107
4871519
+
Genic
1411
NZ_CP028592.1
4871783
4871795
ACGCTC
12
+
2
CGCTCA
C9E72_RS25240
4870107
4871519
+
Intergenic
1676
NZ_CP028592.1
4876126
4876138
AAGTAG
12
-
2
CTACTT
C9E72_RS25260
4875846
4876997
+
Genic
280
NZ_CP028592.1
4877779
4877794
AAAAAT
15
-
2
TTTTTA
C9E72_RS25270
4877771
4878037
+
Genic
8
NZ_CP028592.1
4878307
4878319
AAATCT
12
-
2
TTTAGA
C9E72_RS25275
4878349
4880535
+
Intergenic
-30
NZ_CP028592.1
4878710
4878730
AAAGAT
20
+
3
TAAAGA
C9E72_RS25275
4878349
4880535
+
Genic
361
NZ_CP028592.1
4879033
4879046
AACAAT
13
+
2
ATAACA
C9E72_RS25275
4878349
4880535
+
Genic
684
NZ_CP028592.1
4889266
4889279
AAACAC
13
+
2
ACACAA
C9E72_RS25310
4889298
4889981
+
Intergenic
-19
NZ_CP028592.1
4890666
4890678
ACCGCC
12
-
2
TGGCGG
iadA
4890452
4891624
+
Genic
214
NZ_CP028592.1
4896560
4896572
ACGCAG
12
+
2
GACGCA
C9E72_RS25350
4895617
4897077
-
Genic
505
NZ_CP028592.1
4899840
4899852
ACCAGC
12
-
2
TGCTGG
gntP
4898682
4900025
+
Genic
1158
NZ_CP028592.1
4902954
4902966
ACTGGC
12
+
2
CTGGCA
C9E72_RS25380
4902177
4904813
-
Genic
1847
NZ_CP028592.1
4905607
4905620
AACAGG
13
-
2
TCCTGT
fimC
4904880
4905605
-
Intergenic
-2
NZ_CP028592.1
4905901
4905913
ACACCC
12
+
2
CCACAC
C9E72_RS25390
4905642
4906181
-
Genic
268
NZ_CP028592.1
4914027
4914039
AGGGCG
12
+
2
AGGGCG
C9E72_RS25430
4914772
4916886
-
Intergenic
2847
NZ_CP028592.1
4918291
4918303
ACCGTG
12
-
2
CACGGT
C9E72_RS25435
4916883
4923224
-
Genic
4921
NZ_CP028592.1
4919359
4919371
AACGT
12
+
2
AACGT
C9E72_RS25435
4916883
4923224
-
Genic
3853
NZ_CP028592.1
4924858
4924870
AAACTG
12
+
2
CTGAAA
C9E72_RS25440
4923224
4928158
-
Genic
3288
NZ_CP028592.1
4926165
4926177
ACCGCC
12
+
2
CCACCG
C9E72_RS25440
4923224
4928158
-
Genic
1981