Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2576 to 2600 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
4969846
4969859
AAAGCG
13
+
2
AAGCGA
valS
4967041
4969896
+
Genic
2805
NZ_CP028592.1
4970898
4970912
AAAAAC
14
+
2
AAAAAC
C9E72_RS25620
4969951
4971147
-
Genic
235
NZ_CP028592.1
4971317
4971329
AAAAAT
12
-
2
TTTATT
C9E72_RS25625
4971340
4971843
+
Intergenic
-11
NZ_CP028592.1
4977963
4977975
AAAGTG
12
+
2
GTGAAA
C9E72_RS25660
4977492
4977887
+
Intergenic
471
NZ_CP028592.1
4977971
4977983
AAAAAG
12
+
2
GAAAAA
C9E72_RS25660
4977492
4977887
+
Intergenic
479
NZ_CP028592.1
4978463
4978475
ACCCGT
12
+
2
TACCCG
pyrB
4978306
4979241
+
Genic
157
NZ_CP028592.1
4980542
4980554
ACGATC
12
+
2
ATCACG
mgtA
4980380
4983076
-
Genic
2522
NZ_CP028592.1
4980675
4980687
AAACGC
12
-
2
GCGTTT
mgtA
4980380
4983076
-
Genic
2389
NZ_CP028592.1
4987965
4987978
AAACG
13
+
2
AAACG
nrdD
4988041
4990179
+
Intergenic
-63
NZ_CP028592.1
4988916
4988928
AAAACC
12
-
2
TTTGGT
nrdD
4988041
4990179
+
Genic
875
NZ_CP028592.1
4990199
4990211
ACATC
12
-
2
GATGT
nrdD
4988041
4990179
+
Intergenic
2158
NZ_CP028592.1
4992943
4992958
AAGACG
15
+
2
CGAAGA
C9E72_RS25730
4992894
4993445
+
Genic
49
NZ_CP028592.1
4993359
4993372
AAAGAG
13
+
2
AGAAAG
C9E72_RS25730
4992894
4993445
+
Genic
465
NZ_CP028592.1
4996889
4996901
ACCAGC
12
+
2
ACCAGC
yjfF
4996181
4997176
-
Genic
275
NZ_CP028592.1
4997400
4997412
AGCTCC
12
+
2
TCCAGC
C9E72_RS25750
4997163
4998185
-
Genic
773
NZ_CP028592.1
5002714
5002726
AACGG
12
-
2
CCGTT
C9E72_RS25780
5002524
5002865
-
Genic
139
NZ_CP028592.1
5004160
5004172
ACCTGC
12
+
2
CACCTG
tamB
5002868
5006647
-
Genic
2475
NZ_CP028592.1
5005508
5005522
AAACTG
14
-
2
AGTTTC
tamB
5002868
5006647
-
Genic
1125
NZ_CP028592.1
5006136
5006149
ACCCTG
13
-
2
TCAGGG
tamB
5002868
5006647
-
Genic
498
NZ_CP028592.1
5006602
5006614
AACGAT
12
+
2
GATAAC
tamB
5002868
5006647
-
Genic
33
NZ_CP028592.1
5006930
5006943
AAATAC
13
-
2
ATTTGT
tamA
5006644
5008377
-
Genic
1434
NZ_CP028592.1
5007467
5007480
ACCAGT
13
-
2
TACTGG
tamA
5006644
5008377
-
Genic
897
NZ_CP028592.1
5010859
5010871
AAAGAT
12
+
2
TAAAGA
C9E72_RS25800
5009544
5010887
+
Genic
1315
NZ_CP028592.1
5013536
5013549
ATCCGC
13
+
2
TCCGCA
cysQ
5013281
5014021
-
Genic
472
NZ_CP028592.1
5014863
5014876
AACGAC
13
-
2
TGTCGT
cpdB
5014211
5016154
+
Genic
652