Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2626 to 2650 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
5050251
5050263
CCCGCG
12
-
2
GCGGGC
hflK
5049215
5050474
-
Genic
211
NZ_CP028592.1
5054881
5054901
AGCGCC
20
+
3
GCGCCA
mutL
5053254
5055101
-
Genic
200
NZ_CP028592.1
5055510
5055522
CCCCG
12
+
2
CCCGC
amiB
5055111
5056448
-
Genic
926
NZ_CP028592.1
5055780
5055793
ATCGCC
13
-
2
GCGATG
amiB
5055111
5056448
-
Genic
655
NZ_CP028592.1
5057598
5057612
ACCAGC
14
+
2
ACCAGC
C9E72_RS26070
5056900
5058447
-
Genic
835
NZ_CP028592.1
5058528
5058541
ACCGAT
13
+
2
TACCGA
queG
5058446
5059585
+
Genic
82
NZ_CP028592.1
5059602
5059616
AAAAAT
14
+
2
AATAAA
C9E72_RS26080
5059568
5059621
-
Genic
5
NZ_CP028592.1
5061378
5061390
AATGAC
12
-
2
ATTGTC
rsgA
5061004
5062056
+
Genic
374
NZ_CP028592.1
5065779
5065792
AGCATC
13
-
2
TGCTGA
mscM
5063142
5066465
+
Genic
2637
NZ_CP028592.1
5068657
5068669
AGCC
12
-
3
CTGG
epmA
5068337
5069314
-
Genic
645
NZ_CP028592.1
5070274
5070287
ACCCAT
13
-
2
GGTATG
frdA
5069639
5071447
+
Genic
635
NZ_CP028592.1
5071424
5071436
AAGGAG
12
+
2
AGAAGG
frdA
5069639
5071447
+
Genic
1785
NZ_CP028592.1
5072596
5072610
AAATCC
14
+
2
AATCCA
frdD
5072591
5072950
+
Genic
5
NZ_CP028592.1
5072788
5072800
AACAGG
12
-
2
TTCCTG
frdD
5072591
5072950
+
Genic
197
NZ_CP028592.1
5073142
5073155
ACCGCC
13
-
2
TGGCGG
blaEC
5073013
5074146
+
Genic
129
NZ_CP028592.1
5073602
5073614
AAACTC
12
+
2
ACTCAA
blaEC
5073013
5074146
+
Genic
589
NZ_CP028592.1
5074625
5074637
ACCGG
12
+
2
CGGAC
C9E72_RS26155
5074234
5074767
+
Genic
391
NZ_CP028592.1
5077514
5077527
AAAATT
13
+
2
AAATTA
C9E72_RS26185
5077562
5078431
+
Intergenic
-35
NZ_CP028592.1
5081210
5081222
AAAAAG
12
+
2
GAAAAA
groES
5080805
5081098
-
Intergenic
-112
NZ_CP028592.1
5081533
5081545
AATCGC
12
-
2
CGATTG
yjeH
5081374
5082630
+
Genic
159
NZ_CP028592.1
5082675
5082687
ACCGCG
12
-
2
GCGGTC
fxsA
5082646
5083122
-
Genic
435
NZ_CP028592.1
5086279
5086291
AAGCCG
12
-
2
GCTTCG
C9E72_RS26220
5085013
5086314
+
Genic
1266
NZ_CP028592.1
5093920
5093932
ATC
12
-
4
TGA
C9E72_RS26260
5093170
5095317
+
Genic
750
NZ_CP028592.1
5094768
5094780
AACAGG
12
-
2
CTGTTC
C9E72_RS26260
5093170
5095317
+
Genic
1598
NZ_CP028592.1
5100983
5100995
CCGCG
12
+
2
CGCCG
dcuS
5100125
5101756
+
Genic
858