Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2676 to 2700 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
5142848
5142862
AAAGGC
14
+
2
AAAGGC
C9E72_RS26500
5142408
5143349
+
Genic
440
NZ_CP028592.1
5144030
5144042
AAGACG
12
+
2
GACGAA
C9E72_RS26505
5143404
5144087
+
Genic
626
NZ_CP028592.1
5146090
5146102
ACAGCG
12
-
2
CGCTGT
C9E72_RS26520
5145957
5146664
-
Genic
562
NZ_CP028592.1
5149096
5149108
AATATC
12
-
2
GATATT
C9E72_RS26530
5149149
5149424
+
Intergenic
-41
NZ_CP028592.1
5151120
5151133
AGCGCC
13
-
2
GGCGCT
mdtO
5150474
5152525
+
Genic
646
NZ_CP028592.1
5151370
5151382
AAAGTG
12
+
2
AGTGAA
mdtO
5150474
5152525
+
Genic
896
NZ_CP028592.1
5156620
5156632
AGCATC
12
-
2
TGATGC
C9E72_RS26555
5156427
5157116
+
Genic
193
NZ_CP028592.1
5158576
5158588
AGGCC
12
+
2
GCCAG
gltP
5157294
5158607
-
Genic
19
NZ_CP028592.1
5159417
5159429
ACGCTG
12
+
2
CGCTGA
nrfG
5158949
5159545
-
Genic
116
NZ_CP028592.1
5159823
5159835
AACAGC
12
-
2
CTGTTG
nrfF
5159542
5159925
-
Genic
90
NZ_CP028592.1
5160554
5160566
AACAGC
12
+
2
AACAGC
C9E72_RS26575
5159918
5161636
-
Genic
1070
NZ_CP028592.1
5161796
5161808
AGCCCC
12
+
2
CAGCCC
nrfD
5161656
5162612
-
Genic
804
NZ_CP028592.1
5162146
5162158
ACCAGC
12
+
2
CCAGCA
nrfD
5161656
5162612
-
Genic
454
NZ_CP028592.1
5162282
5162296
ACCAGC
14
+
2
CAGCAC
nrfD
5161656
5162612
-
Genic
316
NZ_CP028592.1
5163239
5163251
ACGCCG
12
+
2
ACGCCG
nrfC
5162609
5163280
-
Genic
29
NZ_CP028592.1
5165261
5165273
AAAAAG
12
+
2
GAAAAA
nrfA
5163888
5165324
-
Genic
51
NZ_CP028592.1
5168649
5168661
ACC
12
-
4
TGG
actP
5168187
5169836
+
Genic
462
NZ_CP028592.1
5168823
5168836
AACAGC
13
-
2
TGCTGT
actP
5168187
5169836
+
Genic
636
NZ_CP028592.1
5169757
5169769
ACGCTC
12
-
2
GCGTGA
actP
5168187
5169836
+
Genic
1570
NZ_CP028592.1
5172835
5172848
AGCGCC
13
+
2
CCAGCG
C9E72_RS26620
5171463
5173112
-
Genic
264
NZ_CP028592.1
5173016
5173028
AAGCGG
12
+
2
AAGCGG
C9E72_RS26620
5171463
5173112
-
Genic
84
NZ_CP028592.1
5173489
5173501
AGCATC
12
+
2
TCAGCA
C9E72_RS26625
5173263
5174612
-
Genic
1111
NZ_CP028592.1
5174162
5174174
ACCGAT
12
+
2
ACCGAT
C9E72_RS26625
5173263
5174612
-
Genic
438
NZ_CP028592.1
5175113
5175125
AAAGAC
12
+
2
AAAGAC
soxR
5175158
5175622
-
Intergenic
497
NZ_CP028592.1
5184025
5184037
ACCCT
12
+
2
ACCCT
C9E72_RS26675
5184078
5184437
+
Intergenic
-41