Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2701 to 2725 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
5185811
5185823
AGGCGG
12
-
2
TCCGCC
C9E72_RS26680
5184776
5185969
-
Genic
146
NZ_CP028592.1
5186355
5186367
ACAGGC
12
-
2
CCTGTG
alr
5186222
5187301
-
Genic
934
NZ_CP028592.1
5186452
5186464
CCGCG
12
-
2
CGGCG
alr
5186222
5187301
-
Genic
837
NZ_CP028592.1
5190957
5190969
ACCGTC
12
+
2
TCACCG
dusA
5190377
5191414
-
Genic
445
NZ_CP028592.1
5194469
5194481
AAAAT
12
+
2
AAATA
C9E72_RS26735
5194496
5195068
-
Intergenic
587
NZ_CP028592.1
5196227
5196241
ACGAGG
14
+
2
CGAGGA
C9E72_RS26750
5195451
5196764
-
Genic
523
NZ_CP028592.1
5197615
5197628
ACCGTG
13
+
2
GTGACC
C9E72_RS26755
5196829
5197428
-
Intergenic
-187
NZ_CP028592.1
5200885
5200898
AAAAGC
13
+
2
AAGCAA
C9E72_RS26800
5200786
5201067
+
Genic
99
NZ_CP028592.1
5204343
5204356
AAGTGG
13
+
2
GTGGAA
zur
5203906
5204421
+
Genic
437
NZ_CP028592.1
5205922
5205935
AACAGC
13
+
2
AACAGC
dinF
5204788
5206113
-
Genic
178
NZ_CP028592.1
5206573
5206586
AAGAGG
13
-
2
TCTTCC
lexA
5206186
5206794
-
Genic
208
NZ_CP028592.1
5208770
5208784
AAAGAG
14
+
2
GAAAGA
plsB
5207443
5209866
+
Genic
1327
NZ_CP028592.1
5209149
5209162
AGCGCC
13
+
2
GCCAGC
plsB
5207443
5209866
+
Genic
1706
NZ_CP028592.1
5211869
5211881
AAAGAT
12
+
2
AAGATA
C9E72_RS26860
5211626
5213206
-
Genic
1325
NZ_CP028592.1
5213608
5213620
ACCGGC
12
+
2
CACCGG
malM
5213435
5214355
-
Genic
735
NZ_CP028592.1
5213707
5213720
AGCTCC
13
-
2
GCTGGA
malM
5213435
5214355
-
Genic
635
NZ_CP028592.1
5213731
5213744
AAACTG
13
-
2
TTTCAG
malM
5213435
5214355
-
Genic
611
NZ_CP028592.1
5214344
5214356
AAAATG
12
-
2
TTCATT
malM
5213435
5214355
-
Genic
-1
NZ_CP028592.1
5216610
5216624
ACGCTG
14
+
2
ACGCTG
malK
5215918
5217033
-
Genic
409
NZ_CP028592.1
5219993
5220005
AGCGGC
12
-
2
CGCTGC
malF
5218742
5220286
+
Genic
1251
NZ_CP028592.1
5220045
5220058
AAAGTT
13
-
2
CTTTAA
malF
5218742
5220286
+
Genic
1303
NZ_CP028592.1
5220351
5220365
ACTGCT
14
+
2
CTGCTA
malG
5220301
5221191
+
Genic
50
NZ_CP028592.1
5220545
5220558
ACAGCC
13
-
2
GCTGTG
malG
5220301
5221191
+
Genic
244
NZ_CP028592.1
5225298
5225310
AGCCGC
12
-
2
CTGCGG
C9E72_RS26915
5224087
5226183
-
Genic
873
NZ_CP028592.1
5225867
5225879
AAAGAT
12
-
2
CTTTAT
C9E72_RS26915
5224087
5226183
-
Genic
304