Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2751 to 2775 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
5288779
5288792
AGC
13
+
4
CAG
rplL
5288529
5288894
-
Genic
102
NZ_CP028592.1
5290594
5290606
AAAGAC
12
-
2
CTTTGT
rplK
5290458
5290886
-
Genic
280
NZ_CP028592.1
5296735
5296747
ACGCAG
12
+
2
GCAGAC
C9E72_RS27230
5296248
5297276
-
Genic
529
NZ_CP028592.1
5303777
5303789
AAGGAT
12
+
2
GATAAG
btuB
5303602
5305446
-
Genic
1657
NZ_CP028592.1
5304716
5304729
AGCCAT
13
+
2
CATAGC
btuB
5303602
5305446
-
Genic
717
NZ_CP028592.1
5306215
5306227
AAGCGG
12
+
2
GGAAGC
trmA
5305815
5306915
+
Genic
400
NZ_CP028592.1
5310934
5310946
AATCGT
12
-
2
TACGAT
C9E72_RS27290
5310923
5312323
+
Genic
11
NZ_CP028592.1
5315045
5315057
AAAGTG
12
-
2
TTCACT
argB
5314925
5315701
-
Genic
644
NZ_CP028592.1
5315513
5315525
AAAAAG
12
-
2
TTTTTC
argB
5314925
5315701
-
Genic
176
NZ_CP028592.1
5318750
5318762
ACAGCG
12
-
2
TCGCTG
C9E72_RS27320
5318370
5321021
+
Genic
380
NZ_CP028592.1
5321521
5321533
AACACC
12
+
2
ACCAAC
cptA
5321204
5322937
+
Genic
317
NZ_CP028592.1
5322384
5322397
AAATAC
13
+
2
CAAATA
cptA
5321204
5322937
+
Genic
1180
NZ_CP028592.1
5323542
5323555
AAATGC
13
+
2
AAATGC
C9E72_RS27330
5323152
5324003
+
Genic
390
NZ_CP028592.1
5327751
5327764
AAAGCG
13
-
2
CTTTCG
C9E72_RS27350
5327525
5327845
-
Genic
81
NZ_CP028592.1
5327857
5327869
AATT
12
+
3
AATT
C9E72_RS27355
5327860
5328939
-
Genic
1070
NZ_CP028592.1
5327872
5327885
AAATCC
13
+
2
AAATCC
C9E72_RS27355
5327860
5328939
-
Genic
1054
NZ_CP028592.1
5329147
5329159
AATGT
12
-
2
TTACA
ptsP
5329248
5331749
+
Intergenic
-89
NZ_CP028592.1
5331402
5331414
AGCGGC
12
-
2
GCCGCT
ptsP
5329248
5331749
+
Genic
2154
NZ_CP028592.1
5331734
5331746
AACTGG
12
+
2
GAACTG
ptsP
5329248
5331749
+
Genic
2486
NZ_CP028592.1
5333026
5333041
AGCGCC
15
-
2
GGCGCT
gldA
5332434
5333537
+
Genic
592
NZ_CP028592.1
5335819
5335831
ACCCTG
12
-
2
GGTCAG
katG
5335454
5337634
-
Genic
1803
NZ_CP028592.1
5336206
5336218
AAGCAG
12
+
2
AGAAGC
katG
5335454
5337634
-
Genic
1416
NZ_CP028592.1
5338883
5338895
AACAC
12
-
2
TGTTG
metF
5337963
5338853
-
Intergenic
-30
NZ_CP028592.1
5339015
5339028
AAAAAG
13
+
2
AAGAAA
metF
5337963
5338853
-
Intergenic
-162
NZ_CP028592.1
5342368
5342381
ACCAGT
13
+
2
TACCAG
metB
5341637
5342797
-
Genic
416