Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2776 to 2800 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
5345573
5345586
AATGAT
13
-
2
TATCAT
C9E72_RS27425
5345290
5349474
-
Genic
3888
NZ_CP028592.1
5346834
5346846
ACAGCT
12
-
2
GCTGTA
C9E72_RS27425
5345290
5349474
-
Genic
2628
NZ_CP028592.1
5347346
5347358
ACCGC
12
-
2
CGGTG
C9E72_RS27425
5345290
5349474
-
Genic
2116
NZ_CP028592.1
5347808
5347820
ACCATG
12
-
2
GGTCAT
C9E72_RS27425
5345290
5349474
-
Genic
1654
NZ_CP028592.1
5348304
5348317
ACCATC
13
-
2
GGTGAT
C9E72_RS27425
5345290
5349474
-
Genic
1157
NZ_CP028592.1
5348391
5348404
AACGGT
13
+
2
GTAACG
C9E72_RS27425
5345290
5349474
-
Genic
1070
NZ_CP028592.1
5350138
5350151
ACGCGC
13
-
2
CGCGTG
priA
5350049
5352247
+
Genic
89
NZ_CP028592.1
5352103
5352116
AGCGCC
13
-
2
CGCTGG
priA
5350049
5352247
+
Genic
2054
NZ_CP028592.1
5362977
5362989
AAGGTG
12
+
2
GGTGAA
glpX
5362813
5363823
+
Genic
164
NZ_CP028592.1
5366531
5366545
AAAGCG
14
+
2
GCGAAA
C9E72_RS27520
5366178
5366777
+
Genic
353
NZ_CP028592.1
5368034
5368047
AATATG
13
+
2
ATATGA
C9E72_RS27530
5367707
5368462
-
Genic
415
NZ_CP028592.1
5368308
5368321
AAAATC
13
-
2
GATTTT
C9E72_RS27530
5367707
5368462
-
Genic
141
NZ_CP028592.1
5369573
5369585
AACAC
12
-
2
TGTTG
C9E72_RS27535
5368569
5369558
-
Intergenic
-15
NZ_CP028592.1
5372130
5372142
ACGTC
12
+
2
CGTCA
cpxP
5372071
5372571
-
Genic
429
NZ_CP028592.1
5373096
5373108
AACGAC
12
+
2
ACAACG
cpxR
5372721
5373419
+
Genic
375
NZ_CP028592.1
5373461
5373473
AGCGCC
12
-
2
CGCTGG
cpxA
5373416
5374789
+
Genic
45
NZ_CP028592.1
5376358
5376370
AGCGCC
12
+
2
CCAGCG
C9E72_RS27570
5375718
5376701
-
Genic
331
NZ_CP028592.1
5376833
5376845
AAAAAT
12
-
2
TTTTAT
sodA
5376961
5377581
-
Intergenic
736
NZ_CP028592.1
5377459
5377471
AACGCC
12
-
2
GCGTTG
sodA
5376961
5377581
-
Genic
110
NZ_CP028592.1
5378879
5378892
ATGCCC
13
-
2
GGCATG
rhaR
5378897
5379835
-
Intergenic
943
NZ_CP028592.1
5379455
5379467
AAGCTG
12
-
2
TTCAGC
rhaR
5378897
5379835
-
Genic
368
NZ_CP028592.1
5381495
5381507
AATATC
12
+
2
TCAATA
rhaB
5380943
5382412
+
Genic
552
NZ_CP028592.1
5384652
5384664
AGCGCC
12
-
2
GCGCTG
rhaD
5383843
5384667
+
Genic
809
NZ_CP028592.1
5389147
5389161
AAAAGC
14
+
2
AAAAGC
C9E72_RS27630
5388790
5389860
+
Genic
357
NZ_CP028592.1
5391324
5391337
AAGGCG
13
+
2
GCGAAG
C9E72_RS27635
5389860
5391608
+
Genic
1464