Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2826 to 2850 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
5468525
5468539
AGCGCC
14
+
2
CCAGCG
metE
5466724
5468985
-
Genic
446
NZ_CP028592.1
5471485
5471497
ATCGCC
12
-
2
GGCGAT
yigL
5471037
5471837
-
Genic
340
NZ_CP028592.1
5474216
5474228
ACCGGG
12
+
2
CGGGAC
rhtC
5473660
5474280
-
Genic
52
NZ_CP028592.1
5477726
5477738
ACGGCG
12
-
2
GTCGCC
C9E72_RS28040
5477340
5477807
+
Genic
386
NZ_CP028592.1
5477780
5477792
ACCGCC
12
+
2
GCCACC
C9E72_RS28040
5477340
5477807
+
Genic
440
NZ_CP028592.1
5478931
5478944
ACCTAT
13
+
2
CCTATA
C9E72_RS28050
5478793
5479092
-
Genic
148
NZ_CP028592.1
5480463
5480476
AAAT
13
+
3
AAAT
C9E72_RS28065
5480052
5480900
+
Genic
411
NZ_CP028592.1
5482057
5482069
ACGCTC
12
+
2
TCACGC
corA
5481430
5482380
-
Genic
311
NZ_CP028592.1
5482141
5482153
AAG
12
+
4
AAG
corA
5481430
5482380
-
Genic
227
NZ_CP028592.1
5482990
5483002
ACCCTG
12
-
2
GTCAGG
C9E72_RS28080
5482750
5483514
+
Genic
240
NZ_CP028592.1
5484157
5484170
AAAAGC
13
+
2
AAAGCA
C9E72_RS28085
5483597
5484499
+
Genic
560
NZ_CP028592.1
5484589
5484601
AGGGCC
12
-
2
CCCTGG
uvrD
5484544
5486706
-
Genic
2105
NZ_CP028592.1
5486610
5486622
CCCGCG
12
+
2
GCCCGC
uvrD
5484544
5486706
-
Genic
84
NZ_CP028592.1
5486640
5486652
CCGCG
12
-
2
GCGCG
uvrD
5484544
5486706
-
Genic
54
NZ_CP028592.1
5490026
5490038
AAACGC
12
-
2
TTGCGT
C9E72_RS28115
5489964
5490167
-
Genic
129
NZ_CP028592.1
5491915
5491927
ACACCG
12
-
2
TCGGTG
C9E72_RS28130
5490990
5493536
-
Genic
1609
NZ_CP028592.1
5492160
5492172
CCCGG
12
+
2
GCCCG
C9E72_RS28130
5490990
5493536
-
Genic
1364
NZ_CP028592.1
5496749
5496794
ACCTGC
45
+
7
ACCTGC
hemX
5495623
5496834
+
Genic
1126
NZ_CP028592.1
5498589
5498601
AAAT
12
+
3
ATAA
C9E72_RS28155
5498712
5500367
+
Intergenic
-111
NZ_CP028592.1
5502975
5502987
ACGTAG
12
+
2
GTAGAC
C9E72_RS28195
5502682
5504067
-
Genic
1080
NZ_CP028592.1
5503536
5503549
AAAGCC
13
+
2
GCCAAA
C9E72_RS28195
5502682
5504067
-
Genic
518
NZ_CP028592.1
5504736
5504748
AGGCGC
12
-
2
CCTGCG
rffM
5504258
5504998
-
Genic
250
NZ_CP028592.1
5512911
5512923
AGGGCC
12
+
2
GCCAGG
wecC
5512432
5513694
-
Genic
771
NZ_CP028592.1
5516972
5516984
AAACAG
12
+
2
AAACAG
wecA
5515935
5517038
-
Genic
54
NZ_CP028592.1
5517311
5517323
AAGACC
12
-
2
TTGGTC
rho
5517278
5518537
-
Genic
1214