Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2851 to 2875 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
5519340
5519352
AACAG
12
+
2
AACAG
rhlB
5519324
5520589
+
Genic
16
NZ_CP028592.1
5523613
5523625
AACACC
12
-
2
TGGTGT
rep
5522256
5524277
-
Genic
652
NZ_CP028592.1
5524144
5524156
AACCGC
12
+
2
AACCGC
rep
5522256
5524277
-
Genic
121
NZ_CP028592.1
5528701
5528716
AGCGCC
15
+
2
CGCCAG
ilvA
5528039
5529583
-
Genic
867
NZ_CP028592.1
5529011
5529023
CCG
12
+
4
CCG
ilvA
5528039
5529583
-
Genic
560
NZ_CP028592.1
5529069
5529081
AGCGCC
12
+
2
CCAGCG
ilvA
5528039
5529583
-
Genic
502
NZ_CP028592.1
5529241
5529253
ACCGCC
12
-
2
GGCGGT
ilvA
5528039
5529583
-
Genic
330
NZ_CP028592.1
5529452
5529465
ACGAG
13
+
2
AGACG
ilvA
5528039
5529583
-
Genic
118
NZ_CP028592.1
5532573
5532585
AAATAT
12
-
2
ATATTT
ilvM
5532450
5532713
-
Genic
128
NZ_CP028592.1
5535250
5535262
AATATG
12
+
2
ATGAAT
C9E72_RS28345
5534947
5536467
+
Genic
303
NZ_CP028592.1
5543566
5543578
AAAAAG
12
+
2
AAAAAG
C9E72_RS28390
5543590
5544282
+
Intergenic
-12
NZ_CP028592.1
5543792
5543805
ACCGCG
13
+
2
ACCGCG
C9E72_RS28390
5543590
5544282
+
Genic
202
NZ_CP028592.1
5545353
5545365
AATGGC
12
+
2
GGCAAT
C9E72_RS28395
5544305
5545732
+
Genic
1048
NZ_CP028592.1
5547112
5547125
AGCCGG
13
+
2
GAGCCG
rbsK
5546694
5547623
-
Genic
498
NZ_CP028592.1
5548070
5548084
AGCC
14
-
3
GCTG
rbsB
5547749
5548630
-
Genic
546
NZ_CP028592.1
5548956
5548969
AAAATC
13
-
2
TGATTT
rbsC
5548655
5549620
-
Genic
651
NZ_CP028592.1
5550596
5550608
AAACCG
12
-
2
TTCGGT
rbsA
5549625
5551130
-
Genic
522
NZ_CP028592.1
5550881
5550893
AATCCC
12
+
2
AATCCC
rbsA
5549625
5551130
-
Genic
237
NZ_CP028592.1
5552528
5552542
AATCAC
14
+
2
ACAATC
C9E72_RS28430
5551724
5553592
-
Genic
1050
NZ_CP028592.1
5554894
5554906
ACTCTG
12
+
2
ACTCTG
ravA
5553815
5555311
+
Genic
1079
NZ_CP028592.1
5556837
5556849
AGC
12
+
4
GCA
asnA
5556761
5557753
-
Genic
904
NZ_CP028595.1
2585
2600
AGATAT
15
+
2
ATAGAT
C9E72_RS28785
2436
2642
+
Genic
149
NZ_CP028595.1
7976
7988
AAGCAG
12
+
2
GCAGAA
C9E72_RS28825
7999
8094
+
Intergenic
-11
NZ_CP028595.1
10370
10382
AAAAGC
12
+
2
AAAGCA
espP
8214
12116
+
Genic
2156
NZ_CP028595.1
11795
11807
AAGGAC
12
+
2
AAGGAC
espP
8214
12116
+
Genic
3581