Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2901 to 2925 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028595.1
50829
50841
AATAC
12
+
2
ATACA
C9E72_RS29040
50166
50849
-
Genic
8
NZ_CP028595.1
50870
50882
AAAGAG
12
-
2
CTCTTT
C9E72_RS29040
50166
50849
-
Intergenic
-21
NZ_CP028595.1
51334
51346
ACAGCG
12
+
2
GACAGC
ccdA
51308
51526
+
Genic
26
NZ_CP028595.1
53407
53419
AAGCAG
12
-
2
TTCTGC
C9E72_RS29065
53363
54576
-
Genic
1157
NZ_CP028595.1
58565
58577
ACAGCG
12
-
2
TGTCGC
C9E72_RS29085
58431
58703
+
Genic
134
NZ_CP028595.1
61652
61664
AACCGG
12
+
2
ACCGGA
C9E72_RS29110
60828
61382
+
Intergenic
824
NZ_CP028595.1
63094
63107
ACAGT
13
-
2
TGTAC
C9E72_RS29130
63094
63516
+
Genic
0
NZ_CP028595.1
63893
63911
AAGAGG
18
-
3
TTCCTC
C9E72_RS29140
63823
64212
+
Genic
70
NZ_CP028595.1
65823
65835
AGCATC
12
+
2
TCAGCA
C9E72_RS29155
64982
66343
+
Genic
841
NZ_CP028595.1
66229
66242
AAGCAG
13
+
2
GCAGAA
C9E72_RS29155
64982
66343
+
Genic
1247
NZ_CP028595.1
66253
66265
ACCGCT
12
+
2
TACCGC
C9E72_RS29155
64982
66343
+
Genic
1271
NZ_CP028595.1
67133
67177
ACTGCT
44
+
7
TGCTAC
C9E72_RS29165
67039
67494
-
Genic
317
NZ_CP028595.1
68184
68196
AGCCTC
12
+
2
TCAGCC
C9E72_RS29175
67796
68248
+
Genic
388
NZ_CP028595.1
68297
68309
AGGATG
12
+
2
GATGAG
C9E72_RS29180
68305
68538
+
Genic
4
NZ_CP028595.1
69196
69210
AGCGCC
14
-
2
GGCGCT
C9E72_RS29185
68604
70562
+
Genic
592
NZ_CP028595.1
69227
69239
ACCTGC
12
-
2
CAGGTG
C9E72_RS29185
68604
70562
+
Genic
623
NZ_CP028595.1
69568
69580
AGCCGG
12
+
2
GCCGGA
C9E72_RS29185
68604
70562
+
Genic
964
NZ_CP028595.1
70962
70975
ACTGGC
13
+
2
CACTGG
psiB
70617
71051
+
Genic
345
NZ_CP028595.1
71328
71341
AAGGGG
13
-
2
CCTTCC
C9E72_RS29195
71048
71809
+
Genic
280
NZ_CP028595.1
71638
71650
ACTGCC
12
-
2
TGGCAG
C9E72_RS29195
71048
71809
+
Genic
590
NZ_CP028595.1
74659
74671
AAAAGG
12
+
2
GGAAAA
C9E72_RS29210
74422
74853
+
Genic
237
NZ_CP028595.1
75825
75838
AAGGAT
13
-
2
CTTATC
toxB
76612
86121
+
Intergenic
-774
NZ_CP028595.1
80511
80523
AAATAT
12
+
2
AAATAT
toxB
76612
86121
+
Genic
3899
NZ_CP028595.1
83383
83396
AAATCC
13
-
2
TGGATT
toxB
76612
86121
+
Genic
6771
NZ_CP028595.1
83415
83427
AAAATT
12
-
2
AATTTT
toxB
76612
86121
+
Genic
6803