Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2926 to 2950 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028595.1
83761
83774
ACATC
13
-
2
GATGT
toxB
76612
86121
+
Genic
7149
NZ_CP028595.1
83914
83926
AAAAAT
12
+
2
ATAAAA
toxB
76612
86121
+
Genic
7302
NZ_CP028595.1
85667
85680
AAATC
13
-
2
ATTTG
toxB
76612
86121
+
Genic
9055
NZ_CP028595.1
85699
85711
AATACG
12
-
2
CGTATT
toxB
76612
86121
+
Genic
9087
NZ_CP028595.1
88384
88396
ACCTGC
12
+
2
GCACCT
C9E72_RS29270
87890
89428
+
Genic
494
NZ_CP028595.1
88665
88677
AAGACG
12
+
2
GAAGAC
C9E72_RS29270
87890
89428
+
Genic
775
NZ_CP028595.1
90690
90702
AGCGGG
12
+
2
CGGGAG
traX
90830
91576
+
Intergenic
-128
NZ_CP028595.1
90841
90854
AACACG
13
+
2
AACACG
traX
90830
91576
+
Genic
11
NZ_CP028595.1
91108
91120
ATCCCC
12
-
2
TGGGGA
traX
90830
91576
+
Genic
278
NZ_CP028595.1
94066
94078
CCCCGG
12
-
2
GGGCCG
C9E72_RS29300
93748
94209
+
Genic
318
NZ_CP028594.1
161
173
AAGAAT
12
-
2
TTCTTA
C9E72_RS28495
71
700
-
Genic
527
NZ_CP028594.1
3286
3298
AACCGG
12
+
2
GAACCG
C9E72_RS28515
3720
5222
-
Intergenic
1924
NZ_CP028594.1
4082
4094
ATATCC
12
+
2
CATATC
C9E72_RS28515
3720
5222
-
Genic
1128
NZ_CP028594.1
4322
4336
AAATTG
14
-
2
TTTCAA
C9E72_RS28515
3720
5222
-
Genic
886
NZ_CP028594.1
8693
8706
AATGTC
13
-
2
ACATTG
C9E72_RS28545
8804
9067
+
Intergenic
-98
NZ_CP028594.1
9141
9153
AAAATG
12
-
2
TTTCAT
C9E72_RS28545
8804
9067
+
Intergenic
337
NZ_CP028594.1
9871
9885
AAAGAT
14
-
2
TCTTTA
topB
9274
11430
-
Genic
1545
NZ_CP028594.1
12272
12284
AAAAAG
12
-
2
TTTTTC
C9E72_RS28560
12152
12457
-
Genic
173
NZ_CP028594.1
12744
12756
AAAAAT
12
-
2
TTTTAT
C9E72_RS28565
12473
14440
-
Genic
1684
NZ_CP028594.1
16334
16347
AAAAG
13
-
2
TTTCT
C9E72_RS28575
15510
16652
-
Genic
305
NZ_CP028594.1
16338
16350
AAAAAG
12
-
2
TTTTCT
C9E72_RS28575
15510
16652
-
Genic
302
NZ_CP028594.1
21255
21267
AGCCGC
12
+
2
GCCGCA
C9E72_RS28605
21039
21332
-
Genic
65
NZ_CP028594.1
22806
22818
AAATAT
12
-
2
TTATAT
C9E72_RS28620
22269
23264
+
Genic
537
NZ_CP028594.1
25479
25493
ACACC
14
+
2
CACAC
C9E72_RS28645
25436
26440
-
Genic
947
NZ_CP028594.1
25928
25940
AAGTAT
12
-
2
TTATAC
C9E72_RS28645
25436
26440
-
Genic
500