Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 2551 to 2575 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
4927165
4927177
AACAGG
12
+
2
GAACAG
C9E72_RS25440
4923224
4928158
-
Genic
981
NZ_CP028592.1
4927475
4927487
AAAATC
12
+
2
TCAAAA
C9E72_RS25440
4923224
4928158
-
Genic
671
NZ_CP028592.1
4928125
4928137
AAAACG
12
-
2
TTCGTT
C9E72_RS25440
4923224
4928158
-
Genic
21
NZ_CP028592.1
4929208
4929221
AAGAGG
13
-
2
TCTTCC
C9E72_RS25445
4928161
4931019
-
Genic
1798
NZ_CP028592.1
4929803
4929816
AGAGCC
13
-
2
TCTGGC
C9E72_RS25445
4928161
4931019
-
Genic
1203
NZ_CP028592.1
4930541
4930553
AACCAG
12
+
2
CCAGAA
C9E72_RS25445
4928161
4931019
-
Genic
466
NZ_CP028592.1
4931288
4931301
AGCGCG
13
-
2
GCTCGC
C9E72_RS25445
4928161
4931019
-
Intergenic
-269
NZ_CP028592.1
4933551
4933563
AAATTG
12
+
2
AATTGA
C9E72_RS25445
4928161
4931019
-
Intergenic
-2532
NZ_CP028592.1
4935013
4935025
ATCCCG
12
-
2
ATCGGG
C9E72_RS25455
4937556
4940915
-
Intergenic
5890
NZ_CP028592.1
4935090
4935102
ACCCAG
12
+
2
CCAGAC
C9E72_RS25455
4937556
4940915
-
Intergenic
5813
NZ_CP028592.1
4935982
4935994
AAGATG
12
-
2
TCTTCA
C9E72_RS25455
4937556
4940915
-
Intergenic
4921
NZ_CP028592.1
4939246
4939258
AATATT
12
+
2
TAATAT
C9E72_RS25455
4937556
4940915
-
Genic
1657
NZ_CP028592.1
4942923
4942935
AAAAAG
12
+
2
GAAAAA
C9E72_RS25465
4942786
4943493
+
Genic
137
NZ_CP028592.1
4947204
4947216
ACGGCG
12
-
2
GCCGTC
C9E72_RS25490
4946452
4947279
-
Genic
63
NZ_CP028592.1
4947884
4947896
AAATC
12
-
2
TTTGA
C9E72_RS25505
4948047
4950380
-
Intergenic
2484
NZ_CP028592.1
4948181
4948193
AGCCCC
12
+
2
CAGCCC
C9E72_RS25505
4948047
4950380
-
Genic
2187
NZ_CP028592.1
4948861
4948873
AGCGGC
12
-
2
TGCCGC
C9E72_RS25505
4948047
4950380
-
Genic
1507
NZ_CP028592.1
4949554
4949567
AGCCGC
13
-
2
CTGCGG
C9E72_RS25505
4948047
4950380
-
Genic
813
NZ_CP028592.1
4952666
4952678
AAAAAT
12
+
2
AATAAA
C9E72_RS25530
4952166
4952432
-
Intergenic
-234
NZ_CP028592.1
4958184
4958196
AAGATG
12
-
2
CTTCAT
C9E72_RS25575
4957753
4959027
-
Genic
831
NZ_CP028592.1
4961842
4961854
AGGATG
12
+
2
ATGAGG
C9E72_RS25590
4960621
4962123
+
Genic
1221
NZ_CP028592.1
4963104
4963117
AGCGC
13
-
2
CGCTG
lptG
4962284
4963366
-
Genic
249
NZ_CP028592.1
4963469
4963481
ACATCC
12
+
2
TCCACA
lptF
4963366
4964466
-
Genic
985
NZ_CP028592.1
4964053
4964066
AAAGCG
13
-
2
TTCGCT
lptF
4963366
4964466
-
Genic
400
NZ_CP028592.1
4968593
4968605
ATCATG
12
+
2
CATGAT
valS
4967041
4969896
+
Genic
1552