Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 376 to 400 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
672884
672897
AAACGC
13
+
2
GCAAAC
C9E72_RS03350
672446
673453
-
Genic
556
NZ_CP028592.1
673915
673928
AACTTC
13
+
2
ACTTCA
C9E72_RS03355
673534
674412
-
Genic
484
NZ_CP028592.1
674198
674210
AGCGCC
12
+
2
CCAGCG
C9E72_RS03355
673534
674412
-
Genic
202
NZ_CP028592.1
679924
679936
AAACGT
12
+
2
TAAACG
yraP
679917
680492
-
Genic
556
NZ_CP028592.1
684970
684982
AAGCAG
12
-
2
TTCTGC
C9E72_RS03430
684926
686139
-
Genic
1157
NZ_CP028592.1
687537
687549
AATTC
12
-
2
TTGAA
C9E72_RS03440
686529
689045
-
Genic
1496
NZ_CP028592.1
690554
690566
AAATAT
12
-
2
TTATAT
C9E72_RS03450
689849
690433
-
Intergenic
-121
NZ_CP028592.1
694947
694959
ATCGCC
12
-
2
GGCGAT
C9E72_RS03480
694729
695883
-
Genic
924
NZ_CP028592.1
694999
695011
AAGATC
12
+
2
AGATCA
C9E72_RS03480
694729
695883
-
Genic
872
NZ_CP028592.1
696178
696191
AAAAAG
13
+
2
AAAGAA
nagA
696234
697367
-
Intergenic
1176
NZ_CP028592.1
700101
700113
AGCGGC
12
+
2
CAGCGG
kbaZ
699970
701250
-
Genic
1137
NZ_CP028592.1
701322
701334
AAAAAT
12
+
2
ATAAAA
kbaZ
699970
701250
-
Intergenic
-72
NZ_CP028592.1
702096
702108
AAGATG
12
+
2
ATGAAG
C9E72_RS03515
701499
702308
+
Genic
597
NZ_CP028592.1
703219
703231
AAATGC
12
+
2
AATGCA
C9E72_RS03525
702827
703162
-
Intergenic
-57
NZ_CP028592.1
706806
706818
AGCGCC
12
+
2
CAGCGC
garL
706607
707377
+
Genic
199
NZ_CP028592.1
708908
708921
AATATC
13
-
2
TGATAT
garK
708394
709539
+
Genic
514
NZ_CP028592.1
711963
711975
AAAGAC
12
-
2
TTGTCT
tdcR
712059
712403
-
Intergenic
428
NZ_CP028592.1
712535
712547
AAATG
12
-
2
TTCAT
tdcA
712592
713530
+
Intergenic
-45
NZ_CP028592.1
713582
713595
AACCGT
13
-
2
CGGTTA
tdcB
713629
714618
+
Intergenic
-34
NZ_CP028592.1
714473
714485
AGGCGC
12
+
2
AGGCGC
tdcB
713629
714618
+
Genic
844
NZ_CP028592.1
719366
719379
AACGTC
13
+
2
TCAACG
tdcE
717239
719533
+
Genic
2127
NZ_CP028592.1
723101
723113
AGCGCC
12
-
2
CTGGCG
C9E72_RS03615
723006
724316
+
Genic
95
NZ_CP028592.1
728373
728386
AAACGG
13
+
2
ACGGAA
C9E72_RS03645
727644
728630
-
Genic
244
NZ_CP028592.1
734176
734188
ACAGC
12
+
2
CACAG
C9E72_RS03690
733132
734430
-
Genic
242
NZ_CP028592.1
738069
738081
ACTGGC
12
-
2
GTGCCA
C9E72_RS03705
737910
738461
+
Genic
159