Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 401 to 425 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
740045
740058
AGAGGG
13
+
2
AGGGAG
alx
740109
741074
-
Intergenic
1016
NZ_CP028592.1
740959
740971
ACCATG
12
-
2
TCATGG
alx
740109
741074
-
Genic
103
NZ_CP028592.1
743398
743410
AAAAGC
12
-
2
TGCTTT
C9E72_RS03730
743192
743695
-
Genic
285
NZ_CP028592.1
745512
745524
AATCGC
12
-
2
GATTGC
higA
745511
745927
+
Genic
1
NZ_CP028592.1
747034
747046
ATCCGC
12
+
2
TCCGCA
C9E72_RS03750
745972
747990
-
Genic
944
NZ_CP028592.1
748748
748760
CCCGCG
12
+
2
CGCGCC
C9E72_RS03755
748516
750867
-
Genic
2107
NZ_CP028592.1
749490
749503
AACGGC
13
-
2
GCCGTT
C9E72_RS03755
748516
750867
-
Genic
1364
NZ_CP028592.1
750727
750741
AATCGT
14
+
2
TCGTAA
C9E72_RS03755
748516
750867
-
Genic
126
NZ_CP028592.1
753365
753377
AAAAT
12
+
2
AATAA
C9E72_RS03765
752088
753521
-
Genic
144
NZ_CP028592.1
758960
758973
ACACTG
13
-
2
GTCAGT
ygjG
758882
760372
-
Genic
1399
NZ_CP028592.1
762499
762513
AGCGC
14
+
2
GCGCA
C9E72_RS03800
762353
762976
-
Genic
463
NZ_CP028592.1
763202
763214
AATGAT
12
-
2
ATCATT
nfeF
763264
764028
+
Intergenic
-50
NZ_CP028592.1
764037
764049
AAAAAG
12
+
2
AAAAAG
nfeF
763264
764028
+
Intergenic
773
NZ_CP028592.1
766585
766597
AGATC
12
-
2
GATCT
rpoD
764867
766708
-
Genic
111
NZ_CP028592.1
767825
767837
AGCGCC
12
+
2
GCGCCA
dnaG
766903
768648
-
Genic
811
NZ_CP028592.1
768713
768726
AACTAC
13
+
2
TACAAC
rpsU
768759
768974
-
Intergenic
248
NZ_CP028592.1
770588
770601
ACCATC
13
+
2
CACCAT
C9E72_RS03840
770268
771731
-
Genic
1130
NZ_CP028592.1
772699
772711
ACGCCC
12
+
2
GCCCAC
ttdA
772382
773293
-
Genic
582
NZ_CP028592.1
773806
773819
AAAACC
13
-
2
GTTTTG
ttdR
773500
774432
+
Genic
306
NZ_CP028592.1
777046
777058
ACCATG
12
+
2
CCATGA
cca
776629
777867
-
Genic
809
NZ_CP028592.1
777948
777960
AAACGC
12
-
2
TTTGCG
C9E72_RS03880
777931
778551
-
Genic
591
NZ_CP028592.1
783266
783279
AACGTC
13
+
2
ACGTCA
hldE
783005
784438
+
Genic
261
NZ_CP028592.1
785600
785612
AAGCAG
12
-
2
TGCTTC
C9E72_RS03910
785232
786893
-
Genic
1281
NZ_CP028592.1
785769
785781
AAGCCG
12
-
2
TCGGCT
C9E72_RS03910
785232
786893
-
Genic
1112
NZ_CP028592.1
786119
786131
AGCAGG
12
-
2
CTGCTC
C9E72_RS03910
785232
786893
-
Genic
762