Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 426 to 450 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
786353
786365
AACTGG
12
-
2
TTCCAG
C9E72_RS03910
785232
786893
-
Genic
528
NZ_CP028592.1
793338
793350
AGCC
12
+
3
CAGC
C9E72_RS03950
792777
793448
-
Genic
98
NZ_CP028592.1
795868
795880
AGCTGC
12
+
2
GCTGCA
C9E72_RS03960
795282
795911
+
Genic
586
NZ_CP028592.1
796836
796848
AGC
12
-
4
TGC
cpdA
796359
797186
+
Genic
477
NZ_CP028592.1
800939
800951
ACAGCT
12
-
2
GCTGTA
C9E72_RS03985
799752
801893
-
Genic
942
NZ_CP028592.1
802117
802129
AAAAAT
12
-
2
TTTTAT
C9E72_RS03990
802267
803076
+
Intergenic
-138
NZ_CP028592.1
804145
804157
AAACAG
12
-
2
CTGTTT
C9E72_RS04000
804065
805102
+
Genic
80
NZ_CP028592.1
804553
804565
AATACC
12
-
2
ATTGGT
C9E72_RS04000
804065
805102
+
Genic
488
NZ_CP028592.1
805402
805417
AATATC
15
-
2
TGATAT
C9E72_RS04005
805113
806060
+
Genic
289
NZ_CP028592.1
807482
807495
AACGCC
13
+
2
CAACGC
mdaB
807334
807915
-
Genic
420
NZ_CP028592.1
808017
808029
AAGGGT
12
-
2
CTTACC
qseC
808025
809374
-
Genic
1345
NZ_CP028592.1
809445
809457
ACATGC
12
+
2
ATGCAC
qseB
809371
810030
-
Genic
573
NZ_CP028592.1
810469
810481
ACCGTC
12
-
2
GTGACG
ygiW
810182
810574
+
Genic
287
NZ_CP028592.1
814415
814427
AAAGCG
12
+
2
AAGCGA
C9E72_RS04050
812963
815221
+
Genic
1452
NZ_CP028592.1
815720
815732
ACCGTC
12
-
2
GACGGT
plsC
815455
816192
+
Genic
265
NZ_CP028592.1
816010
816022
AAGATT
12
-
2
TTAATC
plsC
815455
816192
+
Genic
555
NZ_CP028592.1
820959
820971
ATCGGC
12
+
2
CGGCAT
dkgA
821480
822307
-
Intergenic
1336
NZ_CP028592.1
824006
824019
AACGGC
13
-
2
TGCCGT
C9E72_RS04090
823769
824668
+
Genic
237
NZ_CP028592.1
825819
825831
AGGGC
12
+
2
GGCAG
metC
825507
826694
-
Genic
863
NZ_CP028592.1
829666
829680
ACCATC
14
-
2
TGGTGA
C9E72_RS04120
829459
829953
+
Genic
207
NZ_CP028592.1
831489
831501
ACC
12
-
4
GTG
C9E72_RS04130
831190
832077
+
Genic
299
NZ_CP028592.1
839158
839170
AAAGCC
12
+
2
AAGCCA
hybG
838969
839217
+
Genic
189
NZ_CP028592.1
843340
843352
ACCCGT
12
+
2
TACCCG
C9E72_RS04185
840411
842270
+
Intergenic
2929
NZ_CP028592.1
845513
845525
AACTGG
12
-
2
CCAGTT
tnpB
846000
846350
-
Intergenic
825
NZ_CP028592.1
846163
846176
AGCATC
13
+
2
CATCAG
tnpB
846000
846350
-
Genic
174