Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 476 to 500 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
904906
904918
ACGGCG
12
+
2
GGCGAC
C9E72_RS04525
904673
905350
-
Genic
432
NZ_CP028592.1
906040
906052
AGCATC
12
+
2
TCAGCA
C9E72_RS04535
906009
906716
-
Genic
664
NZ_CP028592.1
910500
910512
ACGCAG
12
+
2
ACGCAG
fbaA
910568
911647
+
Intergenic
-56
NZ_CP028592.1
911430
911443
ACCGAT
13
+
2
CGATAC
fbaA
910568
911647
+
Genic
862
NZ_CP028592.1
914016
914028
AATCAT
12
-
2
GATTAT
C9E72_RS04575
913732
914472
+
Genic
284
NZ_CP028592.1
914310
914322
AGCCC
12
+
2
CAGCC
C9E72_RS04575
913732
914472
+
Genic
578
NZ_CP028592.1
915184
915197
AAGAGC
13
+
2
CAAGAG
C9E72_RS04580
914639
915217
+
Genic
545
NZ_CP028592.1
917291
917304
AAGTGG
13
-
2
CTTCCA
meaB
917848
918843
-
Intergenic
1539
NZ_CP028592.1
920138
920151
ATCGGC
13
-
2
ATGCCG
scpA
918836
920980
-
Genic
829
NZ_CP028592.1
921909
921921
ACCGT
12
-
2
CGGTA
C9E72_RS04610
921184
922077
-
Genic
156
NZ_CP028592.1
922745
922757
CCGCG
12
-
2
GCGGC
rpiA
922460
923119
+
Genic
285
NZ_CP028592.1
924512
924524
AATATC
12
-
2
TATTGA
C9E72_RS04620
923374
924606
+
Genic
1138
NZ_CP028592.1
924922
924935
AAGGGT
13
-
2
CCCTTA
ibsC
924835
924894
+
Intergenic
87
NZ_CP028592.1
925315
925328
AAGGGT
13
-
2
CCCTTA
C9E72_RS04630
925228
925287
+
Intergenic
87
NZ_CP028592.1
927071
927083
AAGACC
12
-
2
CTTGGT
ygfB
926733
927311
+
Genic
338
NZ_CP028592.1
927167
927181
AAGACG
14
+
2
GACGAA
ygfB
926733
927311
+
Genic
434
NZ_CP028592.1
927737
927749
ATATGC
12
+
2
ATATGC
pepP
927337
928662
+
Genic
400
NZ_CP028592.1
928507
928519
ATCCGC
12
-
2
CGGATG
pepP
927337
928662
+
Genic
1170
NZ_CP028592.1
928698
928711
AGCGCC
13
-
2
CGCTGG
ubiH
928659
929837
+
Genic
39
NZ_CP028592.1
933067
933079
ACCCTC
12
+
2
CCTCAC
gcvH
932629
933018
+
Intergenic
438
NZ_CP028592.1
933606
933619
ATCGCC
13
-
2
ATGGCG
gcvP
933136
936009
+
Genic
470
NZ_CP028592.1
937715
937727
ACCATC
12
+
2
ACCATC
C9E72_RS04695
937653
937964
+
Genic
62
NZ_CP028592.1
939990
940003
ATCGCG
13
+
2
TCGCGA
sdhE
940087
940353
+
Intergenic
-84
NZ_CP028592.1
940733
940745
AAAGAT
12
+
2
AAAGAT
C9E72_RS04715
940334
940741
+
Genic
399
NZ_CP028592.1
945558
945570
AATATC
12
-
2
TGATAT
prfB
944875
945973
+
Genic
683