Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 501 to 525 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
946368
946381
AAAACC
13
+
2
CAAAAC
lysS
945983
947500
+
Genic
385
NZ_CP028592.1
947835
947847
AACGGC
12
+
2
AACGGC
C9E72_RS04750
947543
948091
-
Genic
244
NZ_CP028592.1
949532
949545
ACCGAT
13
+
2
CCGATA
C9E72_RS04765
948341
949789
-
Genic
244
NZ_CP028592.1
951849
951861
ACGAGG
12
-
2
TCGTCC
C9E72_RS04770
950225
952144
+
Genic
1624
NZ_CP028592.1
953568
953582
ACCGAT
14
+
2
CCGATA
C9E72_RS04780
952668
954035
-
Genic
453
NZ_CP028592.1
954724
954737
ATCGCC
13
+
2
CGCCAT
xanQ
955405
956805
-
Intergenic
2068
NZ_CP028592.1
955585
955597
AAACCT
12
+
2
CCTAAA
xanQ
955405
956805
-
Genic
1208
NZ_CP028592.1
957461
957473
ACCGGC
12
-
2
GCCGGT
C9E72_RS04795
956970
959840
-
Genic
2367
NZ_CP028592.1
958711
958725
ATCGGC
14
+
2
CATCGG
C9E72_RS04795
956970
959840
-
Genic
1115
NZ_CP028592.1
962137
962149
ACGAGT
12
-
2
TCGTAC
ygfK
961997
965095
-
Genic
2946
NZ_CP028592.1
962796
962808
ACG
12
+
4
GAC
ygfK
961997
965095
-
Genic
2287
NZ_CP028592.1
967300
967312
AACGGC
12
-
2
TTGCCG
C9E72_RS04825
966916
968541
+
Genic
384
NZ_CP028592.1
975119
975131
ATCATG
12
+
2
ATGATC
C9E72_RS04855
975189
976967
+
Intergenic
-58
NZ_CP028592.1
977177
977189
ACTGC
12
+
2
GCACT
xdhC
977007
977486
-
Genic
297
NZ_CP028592.1
978675
978689
AATGGG
14
-
2
CCCATT
xdhA
978372
980669
-
Genic
1980
NZ_CP028592.1
983453
983465
ACCGAT
12
+
2
ACCGAT
C9E72_RS04890
983898
984077
+
Intergenic
-433
NZ_CP028592.1
984390
984402
AATGAG
12
+
2
GAGAAT
C9E72_RS04895
984423
985172
+
Intergenic
-21
NZ_CP028592.1
988652
988664
ACTCCT
12
-
2
AGTAGG
C9E72_RS04910
988015
990075
+
Genic
637
NZ_CP028592.1
988945
988959
AAAAGT
14
-
2
TTTACT
C9E72_RS04910
988015
990075
+
Genic
930
NZ_CP028592.1
989472
989484
ACAG
12
-
3
TCTG
C9E72_RS04910
988015
990075
+
Genic
1457
NZ_CP028592.1
990111
990124
AAAATT
13
+
2
AAAATT
C9E72_RS04915
990107
991399
+
Genic
4
NZ_CP028592.1
991471
991483
AAAAAG
12
+
2
AGAAAA
C9E72_RS04920
991389
991847
+
Genic
82
NZ_CP028592.1
994172
994185
ATC
13
-
4
ATG
C9E72_RS04935
993636
994301
+
Genic
536
NZ_CP028592.1
999842
999855
AAAAAT
13
+
2
AAATAA
C9E72_RS04985
999368
1000102
+
Genic
474
NZ_CP028592.1
1001382
1001394
AATTAG
12
-
2
TCTAAT
C9E72_RS05000
1001140
1001349
+
Intergenic
242