Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 551 to 575 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
1063731
1063743
AACTTC
12
-
2
TGAAGT
fucA
1063217
1063864
+
Genic
514
NZ_CP028592.1
1066160
1066172
ACAGGT
12
-
2
ACCTGT
C9E72_RS05315
1065962
1067329
-
Genic
1157
NZ_CP028592.1
1068235
1068247
AGGATC
12
+
2
GATCAG
C9E72_RS05320
1067387
1068676
-
Genic
429
NZ_CP028592.1
1073979
1073992
AAGCAG
13
+
2
AGAAGC
C9E72_RS05350
1073921
1074370
+
Genic
58
NZ_CP028592.1
1074310
1074322
AACCGG
12
+
2
CCGGAA
C9E72_RS05350
1073921
1074370
+
Genic
389
NZ_CP028592.1
1074533
1074547
AACAAG
14
-
2
TTCTTG
C9E72_RS05350
1073921
1074370
+
Intergenic
612
NZ_CP028592.1
1075814
1075827
ACCATC
13
-
2
GATGGT
C9E72_RS05355
1074805
1076157
+
Genic
1009
NZ_CP028592.1
1076100
1076112
ACCAGC
12
-
2
CTGGTG
C9E72_RS05355
1074805
1076157
+
Genic
1295
NZ_CP028592.1
1078865
1078877
AAAACC
12
+
2
AAAACC
gudD
1077520
1078860
+
Intergenic
1345
NZ_CP028592.1
1080390
1080403
AGCCCC
13
+
2
CCAGCC
barA
1079093
1081849
-
Genic
1446
NZ_CP028592.1
1082058
1082071
AACAGT
13
-
2
GTTACT
rlmD
1081906
1083207
+
Genic
152
NZ_CP028592.1
1085809
1085821
AATGGT
12
+
2
TGGTAA
mazF
1085815
1086150
+
Genic
-6
NZ_CP028592.1
1087446
1087459
ACCTGG
13
+
2
GACCTG
pyrG
1087240
1088877
+
Genic
206
NZ_CP028592.1
1090341
1090353
ACCGCC
12
+
2
CCGCCA
C9E72_RS05415
1090323
1091237
-
Genic
884
NZ_CP028592.1
1092413
1092426
ACCGCC
13
+
2
CGCCAC
C9E72_RS05420
1091234
1092382
-
Intergenic
-31
NZ_CP028592.1
1092450
1092462
AATGAC
12
-
2
ATTGTC
C9E72_RS05420
1091234
1092382
-
Intergenic
-68
NZ_CP028592.1
1093309
1093321
AATGCT
12
-
2
AGCATT
C9E72_RS05430
1093304
1093924
-
Genic
603
NZ_CP028592.1
1094856
1094868
AATGAT
12
-
2
ATCATT
queE
1094079
1094750
+
Intergenic
777
NZ_CP028592.1
1096219
1096231
ACGCTG
12
-
2
TCAGCG
C9E72_RS05440
1095813
1097291
-
Genic
1060
NZ_CP028592.1
1100096
1100109
AATATC
13
-
2
ATATTG
C9E72_RS05455
1099769
1101223
+
Genic
327
NZ_CP028592.1
1106190
1106202
AAGCCG
12
-
2
TTCGGC
C9E72_RS05485
1105258
1106529
-
Genic
327
NZ_CP028592.1
1106499
1106511
AAT
12
+
4
AAT
C9E72_RS05485
1105258
1106529
-
Genic
18
NZ_CP028592.1
1107447
1107460
AGCGCC
13
+
2
CGCCAG
cysJ
1107288
1109087
+
Genic
159
NZ_CP028592.1
1108851
1108863
AAAAAG
12
+
2
AAAAAG
cysJ
1107288
1109087
+
Genic
1563
NZ_CP028592.1
1110926
1110938
AGCGCC
12
-
2
CTGGCG
cysH
1110873
1111607
+
Genic
53