Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 576 to 600 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
1113093
1113105
AGATCC
12
-
2
CTGGAT
C9E72_RS05520
1112215
1114914
+
Genic
878
NZ_CP028592.1
1115770
1115782
AATACG
12
-
2
CGTATT
casA
1115012
1116574
+
Genic
758
NZ_CP028592.1
1117040
1117052
ACGGAT
12
-
2
TATCCG
casB
1116571
1117107
+
Genic
469
NZ_CP028592.1
1117747
1117759
ACCGGC
12
-
2
TGCCGG
cas7e
1117119
1118174
+
Genic
628
NZ_CP028592.1
1118543
1118555
ACCGCC
12
-
2
GGTGGC
cas5e
1118185
1118931
+
Genic
358
NZ_CP028592.1
1120432
1120444
AACCTG
12
+
2
CCTGAA
cas1e
1119560
1120483
+
Genic
872
NZ_CP028592.1
1121808
1121822
AGATGC
14
-
2
GCATCT
C9E72_RS05560
1121163
1122200
-
Genic
378
NZ_CP028592.1
1130121
1130133
ACCGGC
12
+
2
CACCGG
nlpD
1130028
1131167
+
Genic
93
NZ_CP028592.1
1132659
1132672
ACCTG
13
-
2
GGTCA
C9E72_RS05625
1132342
1132749
-
Genic
77
NZ_CP028592.1
1133243
1133256
ACCAGC
13
-
2
CTGGTG
C9E72_RS05630
1132896
1133489
+
Genic
347
NZ_CP028592.1
1133584
1133596
AGCGGC
12
-
2
GCTGCC
C9E72_RS05635
1133489
1134916
+
Genic
95
NZ_CP028592.1
1134046
1134058
AGATGC
12
-
2
CTGCAT
C9E72_RS05635
1133489
1134916
+
Genic
557
NZ_CP028592.1
1136395
1136407
ACGCCC
12
+
2
CACGCC
mutS
1135966
1138527
-
Genic
2120
NZ_CP028592.1
1136883
1136896
AGCGCG
13
-
2
CGCGCT
mutS
1135966
1138527
-
Genic
1631
NZ_CP028592.1
1138898
1138910
AGCCGG
12
+
2
CGGAGC
C9E72_RS05655
1138814
1139167
+
Genic
84
NZ_CP028592.1
1141643
1141655
AACCGC
12
+
2
ACCGCA
hypE
1141356
1142366
-
Genic
711
NZ_CP028592.1
1141947
1141959
CCGCG
12
+
2
GCCGC
hypE
1141356
1142366
-
Genic
407
NZ_CP028592.1
1144595
1144607
AACCGC
12
+
2
ACCGCA
hypB
1143747
1144619
-
Genic
12
NZ_CP028592.1
1145111
1145123
AAT
12
+
4
TAA
hycA
1145185
1145646
+
Intergenic
-62
NZ_CP028592.1
1146405
1146417
ACGCC
12
-
2
GGCGT
hycC
1146379
1148205
+
Genic
26
NZ_CP028592.1
1146445
1146457
AAAAG
12
-
2
TCTTT
hycC
1146379
1148205
+
Genic
66
NZ_CP028592.1
1146812
1146824
AACAGC
12
+
2
CAGCAA
hycC
1146379
1148205
+
Genic
433
NZ_CP028592.1
1147277
1147289
AGCCCC
12
-
2
GCTGGG
hycC
1146379
1148205
+
Genic
898
NZ_CP028592.1
1147752
1147764
AAGCGT
12
+
2
AGCGTA
hycC
1146379
1148205
+
Genic
1373
NZ_CP028592.1
1148842
1148855
AGCGGC
13
+
2
CAGCGG
hycD
1148208
1149131
+
Genic
634