Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 626 to 650 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
1198953
1198965
AAG
12
+
4
GAA
stpA
1198831
1199235
+
Genic
122
NZ_CP028592.1
1205474
1205489
AGCGCC
15
+
2
CGCCAG
gabD
1204605
1206053
-
Genic
564
NZ_CP028592.1
1206961
1206973
AGCGCG
12
-
2
TCGCGC
lhgO
1206076
1207344
-
Genic
371
NZ_CP028592.1
1207504
1207516
AACGGG
12
+
2
AACGGG
csiD
1207364
1208341
-
Genic
825
NZ_CP028592.1
1209283
1209295
AACATT
12
-
2
GTTAAT
csiD
1207364
1208341
-
Intergenic
-942
NZ_CP028592.1
1212950
1212963
ACTCTG
13
-
2
GTCAGA
C9E72_RS06045
1212319
1213668
+
Genic
631
NZ_CP028592.1
1213538
1213550
AAAAAT
12
+
2
AAAAAT
C9E72_RS06045
1212319
1213668
+
Genic
1219
NZ_CP028592.1
1214224
1214236
AAAAGT
12
+
2
GTAAAA
C9E72_RS06050
1214056
1214265
+
Genic
168
NZ_CP028592.1
1215470
1215482
AACACT
12
+
2
ACTAAC
C9E72_RS06055
1214420
1214539
+
Intergenic
1050
NZ_CP028592.1
1219005
1219017
AAGGTG
12
+
2
GGTGAA
C9E72_RS06065
1219616
1220467
+
Intergenic
-599
NZ_CP028592.1
1227582
1227724
AGAGCC
142
+
23
GCCAGA
C9E72_RS06100
1226564
1227820
+
Genic
1018
NZ_CP028592.1
1229065
1229154
AAATAG
89
-
14
TATTTC
C9E72_RS06110
1228234
1228989
-
Intergenic
-76
NZ_CP028592.1
1229907
1229919
AAATGT
12
+
2
AAATGT
C9E72_RS06120
1229890
1230501
+
Genic
17
NZ_CP028592.1
1230069
1230081
AAACAG
12
+
2
CAGAAA
C9E72_RS06120
1229890
1230501
+
Genic
179
NZ_CP028592.1
1232909
1232921
ACCATC
12
-
2
GTGATG
C9E72_RS06140
1232865
1233032
+
Genic
44
NZ_CP028592.1
1235201
1235215
ACGCTG
14
+
2
CGCTGA
C9E72_RS06145
1233440
1235293
+
Genic
1761
NZ_CP028592.1
1235717
1235730
AACAGT
13
-
2
TTACTG
C9E72_RS06155
1235663
1236007
+
Genic
54
NZ_CP028592.1
1239283
1239295
AATACC
12
-
2
TATTGG
C9E72_RS06190
1238688
1239746
-
Genic
451
NZ_CP028592.1
1241182
1241195
AATATC
13
-
2
GATATT
espM2
1240658
1241248
+
Genic
524
NZ_CP028592.1
1241636
1241648
AAAAAG
12
+
2
GAAAAA
C9E72_RS06215
1241750
1241998
-
Intergenic
350
NZ_CP028592.1
1243063
1243075
ACCCGT
12
-
2
CGGGTA
smpB
1242844
1243326
-
Genic
251
NZ_CP028592.1
1245520
1245532
AACTTG
12
-
2
GTTCAA
recN
1244766
1246427
-
Genic
895
NZ_CP028592.1
1246583
1246595
AATCTG
12
-
2
TCAGAT
nadK
1246513
1247391
-
Genic
796
NZ_CP028592.1
1248240
1248252
ATATCG
12
+
2
ATATCG
C9E72_RS06260
1248162
1249448
-
Genic
1196
NZ_CP028592.1
1251571
1251583
ACGATG
12
+
2
CGATGA
C9E72_RS06270
1250428
1251789
+
Genic
1143