Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 676 to 700 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
1305688
1305700
AGCGCC
12
-
2
CGCTGG
purL
1302304
1306191
+
Genic
3384
NZ_CP028592.1
1307161
1307173
AGC
12
-
4
TGC
qseE
1306767
1308194
+
Genic
394
NZ_CP028592.1
1308295
1308307
ACATGG
12
-
2
TGTCCA
qseG
1308359
1309072
+
Intergenic
-52
NZ_CP028592.1
1308864
1308876
ACAGCG
12
+
2
CAGCGA
qseG
1308359
1309072
+
Genic
505
NZ_CP028592.1
1313500
1313512
AGCC
12
-
3
CTGG
C9E72_RS06570
1312358
1313611
+
Genic
1142
NZ_CP028592.1
1315086
1315098
AAGCAG
12
+
2
GCAGAA
C9E72_RS06580
1313930
1315143
+
Genic
1156
NZ_CP028592.1
1315592
1315605
AGCGCC
13
+
2
CGCCAG
C9E72_RS06585
1315146
1316180
-
Genic
575
NZ_CP028592.1
1317619
1317632
AACGGC
13
-
2
GTTGCC
C9E72_RS06590
1316298
1319579
+
Genic
1321
NZ_CP028592.1
1317791
1317803
AGCGCC
12
-
2
CTGGCG
C9E72_RS06590
1316298
1319579
+
Genic
1493
NZ_CP028592.1
1318941
1318953
AAGGG
12
+
2
GGGAA
C9E72_RS06590
1316298
1319579
+
Genic
2643
NZ_CP028592.1
1319852
1319864
ACAGGT
12
+
2
GTACAG
C9E72_RS06595
1319676
1320659
+
Genic
176
NZ_CP028592.1
1325164
1325176
AAGCGC
12
-
2
TTGCGC
C9E72_RS06615
1324354
1325226
+
Genic
810
NZ_CP028592.1
1325530
1325543
ATCGGC
13
+
2
GCATCG
C9E72_RS06620
1325274
1325696
-
Genic
153
NZ_CP028592.1
1325668
1325680
AAAATC
12
+
2
CAAAAT
C9E72_RS06620
1325274
1325696
-
Genic
16
NZ_CP028592.1
1326081
1326093
AGCGGC
12
+
2
GCGGCA
C9E72_RS06625
1325793
1326995
-
Genic
902
NZ_CP028592.1
1328391
1328403
ATGCC
12
+
2
CCATG
C9E72_RS06640
1328134
1328652
-
Genic
249
NZ_CP028592.1
1329411
1329423
AACTGC
12
-
2
CAGTTG
C9E72_RS06645
1328649
1330010
-
Genic
587
NZ_CP028592.1
1331896
1331908
AGGCCG
12
-
2
CTCGGC
C9E72_RS06655
1331196
1332335
+
Genic
700
NZ_CP028592.1
1332371
1332383
ACACTG
12
-
2
TGTCAG
csiE
1332327
1333607
-
Genic
1224
NZ_CP028592.1
1346318
1346330
AGCGCC
12
-
2
GCTGGC
C9E72_RS06735
1346284
1351245
+
Genic
34
NZ_CP028592.1
1350945
1350957
AACTGG
12
+
2
CTGGAA
C9E72_RS06735
1346284
1351245
+
Genic
4661
NZ_CP028592.1
1352040
1352052
AAAAGC
12
+
2
AAAAGC
pbpC
1351246
1353558
+
Genic
794
NZ_CP028592.1
1358936
1358949
AAGGCG
13
+
2
GGCGAA
C9E72_RS06765
1358538
1358969
+
Genic
398
NZ_CP028592.1
1359643
1359655
ATGCCC
12
-
2
ATGGGC
trmG/rlmN
1359119
1360273
+
Genic
524
NZ_CP028592.1
1364102
1364114
AAGGAG
12
+
2
GAAGGA
hisS
1362827
1364101
+
Intergenic
1275