Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 701 to 725 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
1364359
1364371
AAAAAT
12
+
2
AAAATA
C9E72_RS06790
1364119
1364739
+
Genic
240
NZ_CP028592.1
1367932
1367944
ACTGCT
12
-
2
CAGTAG
xseA
1367799
1369169
-
Genic
1225
NZ_CP028592.1
1368249
1368261
AACAGC
12
-
2
TGCTGT
xseA
1367799
1369169
-
Genic
908
NZ_CP028592.1
1369817
1369829
AAGGTG
12
+
2
GTGAAG
guaB
1369331
1370797
+
Genic
486
NZ_CP028592.1
1374738
1374753
AATGAT
15
-
2
ATTATC
pdeF
1374463
1376706
+
Genic
275
NZ_CP028592.1
1376788
1376800
AGCC
12
+
3
GCCA
ppx
1376745
1378286
-
Genic
1486
NZ_CP028592.1
1381713
1381725
ACGCCC
12
+
2
CCACGC
purM
1381166
1382203
-
Genic
478
NZ_CP028592.1
1388800
1388812
AATGGC
12
+
2
AATGGC
C9E72_RS06895
1388618
1389466
-
Genic
654
NZ_CP028592.1
1390361
1390373
AACCGG
12
-
2
CCGGTT
C9E72_RS06900
1389488
1391500
-
Genic
1127
NZ_CP028592.1
1393821
1393833
AATGCC
12
+
2
AATGCC
hyfG
1393246
1394961
-
Genic
1128
NZ_CP028592.1
1395347
1395361
AGCGCC
14
+
2
GCCAGC
hyfF
1394951
1396531
-
Genic
1170
NZ_CP028592.1
1395856
1395868
AAACAC
12
+
2
CACAAA
hyfF
1394951
1396531
-
Genic
663
NZ_CP028592.1
1397060
1397073
ACCAGC
13
+
2
CACCAG
hyfE
1396536
1397186
-
Genic
113
NZ_CP028592.1
1398454
1398466
AACGTC
12
+
2
CAACGT
C9E72_RS06935
1397198
1398637
-
Genic
171
NZ_CP028592.1
1398902
1398915
AGCCCC
13
+
2
CAGCCC
hyfC
1398654
1399601
-
Genic
686
NZ_CP028592.1
1398920
1398933
AGCGCC
13
+
2
CGCCAG
hyfC
1398654
1399601
-
Genic
668
NZ_CP028592.1
1399342
1399354
ACCAGC
12
+
2
CCAGCA
hyfC
1398654
1399601
-
Genic
247
NZ_CP028592.1
1400547
1400559
CCCGCG
12
+
2
CGCGCC
hyfB
1399612
1401630
-
Genic
1071
NZ_CP028592.1
1402128
1402140
AGGGCC
12
+
2
GCCAGG
hyfA
1401630
1402247
-
Genic
107
NZ_CP028592.1
1403271
1403286
ACGCGG
15
+
2
GCGGAC
C9E72_RS06960
1402970
1403542
-
Genic
256
NZ_CP028592.1
1404426
1404438
AATCC
12
+
2
CCAAT
dapA
1403688
1404566
+
Genic
738
NZ_CP028592.1
1405099
1405111
AACCGT
12
-
2
CGGTTA
bamC
1404583
1405617
+
Genic
516
NZ_CP028592.1
1413709
1413722
AGCGCC
13
+
2
CGCCAG
acrD
1412711
1415824
-
Genic
2102
NZ_CP028592.1
1414156
1414170
AACAGG
14
+
2
CAGGAA
acrD
1412711
1415824
-
Genic
1654
NZ_CP028592.1
1416226
1416238
AACGCC
12
-
2
TGGCGT
narQ
1415988
1417688
-
Genic
1450