Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 651 to 675 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
1251649
1251661
ACCTGC
12
-
2
TGCAGG
C9E72_RS06270
1250428
1251789
+
Genic
1221
NZ_CP028592.1
1252078
1252091
AGATCC
13
-
2
CTGGAT
rpsP
1251926
1252174
+
Genic
152
NZ_CP028592.1
1261285
1261297
AGATGC
12
-
2
CATCTG
bamD
1261229
1261966
-
Genic
669
NZ_CP028592.1
1261557
1261569
ATCGCG
12
+
2
GATCGC
bamD
1261229
1261966
-
Genic
397
NZ_CP028592.1
1262362
1262376
AAGATG
14
+
2
ATGAAG
rluD
1262101
1263081
+
Genic
261
NZ_CP028592.1
1263993
1264005
AAGTGC
12
-
2
CACTTG
clpB
1263939
1266512
+
Genic
54
NZ_CP028592.1
1273650
1273662
AGCTCC
12
+
2
TCCAGC
C9E72_RS06385
1273583
1273906
-
Genic
244
NZ_CP028592.1
1274153
1274165
AGATCC
12
+
2
TCCAGA
pssA
1273952
1275307
-
Genic
1142
NZ_CP028592.1
1274774
1274786
AACCGT
12
-
2
TTACGG
pssA
1273952
1275307
-
Genic
521
NZ_CP028592.1
1277165
1277178
AGCGCC
13
+
2
CCAGCG
pat
1275421
1278081
-
Genic
903
NZ_CP028592.1
1281803
1281815
AACGTT
12
+
2
AACGTT
grcA
1281585
1281968
+
Genic
218
NZ_CP028592.1
1282271
1282283
AAAGC
12
+
2
GCAAA
eamB
1282024
1282611
-
Genic
328
NZ_CP028592.1
1282370
1282382
CCCCCG
12
+
2
CCGCCC
eamB
1282024
1282611
-
Genic
229
NZ_CP028592.1
1283201
1283213
ACCAGC
12
-
2
GCTGGT
C9E72_RS06430
1282714
1283595
+
Genic
487
NZ_CP028592.1
1283724
1283738
AAAGAG
14
-
2
TTCTCT
srmB
1283628
1284962
-
Genic
1224
NZ_CP028592.1
1284181
1284193
ACGCTC
12
+
2
CACGCT
srmB
1283628
1284962
-
Genic
769
NZ_CP028592.1
1289548
1289560
ACAGCT
12
+
2
GCTACA
rseB
1289092
1290048
+
Genic
456
NZ_CP028592.1
1290858
1290872
ACGCTC
14
-
2
TGAGCG
lepA
1290722
1292521
+
Genic
136
NZ_CP028592.1
1291798
1291810
AGATCC
12
-
2
GATCTG
lepA
1290722
1292521
+
Genic
1076
NZ_CP028592.1
1292415
1292427
AAGCAG
12
+
2
GCAGAA
lepA
1290722
1292521
+
Genic
1693
NZ_CP028592.1
1292708
1292720
AGCC
12
-
3
CTGG
lepB
1292537
1293511
+
Genic
171
NZ_CP028592.1
1293690
1293702
AAACTG
12
+
2
AAACTG
C9E72_RS06485
1293784
1294464
+
Intergenic
-82
NZ_CP028592.1
1294287
1294299
AGCGGC
12
-
2
CTGCCG
C9E72_RS06485
1293784
1294464
+
Genic
503
NZ_CP028592.1
1298943
1298955
ACTG
12
+
3
GACT
C9E72_RS06520
1298241
1299089
-
Genic
134
NZ_CP028592.1
1300668
1300681
AAAGAG
13
-
2
TTCTCT
mltF
1300491
1302047
-
Genic
1366