Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 526 to 550 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
1001577
1001589
AAAATT
12
+
2
AAAATT
C9E72_RS05000
1001140
1001349
+
Intergenic
437
NZ_CP028592.1
1003616
1003630
AACTTG
14
-
2
CAAGTT
ygeH
1003291
1004571
-
Genic
941
NZ_CP028592.1
1005254
1005268
ATATGC
14
+
2
ATGCAT
C9E72_RS05030
1004905
1005396
-
Genic
128
NZ_CP028592.1
1008829
1008842
ATATCC
13
+
2
ATATCC
C9E72_RS05060
1008736
1009368
-
Genic
526
NZ_CP028592.1
1011485
1011497
AGGGGC
12
+
2
GCAGGG
C9E72_RS05070
1011312
1012493
+
Genic
173
NZ_CP028592.1
1012319
1012332
AATGTC
13
+
2
GTCAAT
C9E72_RS05070
1011312
1012493
+
Genic
1007
NZ_CP028592.1
1013391
1013403
AAATAG
12
-
2
TATTTC
kduI
1012780
1013616
+
Genic
611
NZ_CP028592.1
1014186
1014198
AACATT
12
-
2
TTAATG
kduD
1013646
1014407
+
Genic
540
NZ_CP028592.1
1017578
1017590
AGGC
12
+
3
GGCA
C9E72_RS05095
1016948
1017883
-
Genic
293
NZ_CP028592.1
1018025
1018037
ACCGAT
12
+
2
ACCGAT
lysA
1018005
1019267
+
Genic
20
NZ_CP028592.1
1020152
1020164
AACGCC
12
-
2
GGCGTT
galR
1019274
1020305
-
Genic
141
NZ_CP028592.1
1020931
1020944
AACGCG
13
-
2
TCGCGT
C9E72_RS05115
1020891
1023050
+
Genic
40
NZ_CP028592.1
1024163
1024176
AATGCC
13
-
2
CATTGG
lplT
1023043
1024236
+
Genic
1120
NZ_CP028592.1
1026425
1026437
ACGCTG
12
-
2
CAGCGT
C9E72_RS05135
1025772
1026485
-
Genic
48
NZ_CP028592.1
1028209
1028221
AAAAAC
12
+
2
CAAAAA
rppH
1027928
1028458
+
Genic
281
NZ_CP028592.1
1031812
1031826
AACCGG
14
+
2
ACCGGA
thyA
1031750
1032544
+
Genic
62
NZ_CP028592.1
1034538
1034550
AACGCG
12
+
2
CGAACG
recC
1034477
1037845
+
Genic
61
NZ_CP028592.1
1035502
1035514
AACTGG
12
+
2
CTGGAA
recC
1034477
1037845
+
Genic
1025
NZ_CP028592.1
1035627
1035640
AACTTC
13
-
2
TGAAGT
recC
1034477
1037845
+
Genic
1150
NZ_CP028592.1
1046966
1046978
AAGCGC
12
-
2
GCGCTT
C9E72_RS05210
1046332
1047663
-
Genic
685
NZ_CP028592.1
1049598
1049610
AAAAAC
12
+
2
AACAAA
C9E72_RS05230
1049442
1049518
-
Intergenic
-80
NZ_CP028592.1
1051263
1051275
AATACC
12
+
2
ACCAAT
tcdA
1051063
1051869
+
Genic
200
NZ_CP028592.1
1053252
1053264
ACGCGG
12
+
2
GACGCG
csdA
1052363
1053568
-
Genic
304
NZ_CP028592.1
1054753
1054765
AACATC
12
-
2
TGATGT
gcvA
1054338
1055255
+
Genic
415
NZ_CP028592.1
1061386
1061398
AAAGAT
12
+
2
AAAGAT
fucP
1061354
1062670
-
Genic
1272