Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 451 to 475 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
846469
846481
AAGTGG
12
+
2
AGTGGA
C9E72_RS04220
846573
848111
-
Intergenic
1630
NZ_CP028592.1
847323
847335
AAGACG
12
-
2
GTCTTC
C9E72_RS04220
846573
848111
-
Genic
776
NZ_CP028592.1
847604
847616
ACCTGC
12
-
2
AGGTGC
C9E72_RS04220
846573
848111
-
Genic
495
NZ_CP028592.1
849855
849867
AAGCAG
12
+
2
GCAGAA
C9E72_RS04235
848699
849912
+
Genic
1156
NZ_CP028592.1
853091
853103
AAGATG
12
-
2
CTTCAT
nleE
853962
854636
-
Intergenic
1533
NZ_CP028592.1
853515
853527
AGCATC
12
+
2
CAGCAT
nleE
853962
854636
-
Intergenic
1109
NZ_CP028592.1
859488
859500
AAAAAG
12
-
2
TTTCTT
C9E72_RS04275
858012
858206
+
Intergenic
1476
NZ_CP028592.1
868792
868804
AGCTCC
12
-
2
GCTGGA
C9E72_RS04345
868539
870674
+
Genic
253
NZ_CP028592.1
883912
883924
AGAGGC
12
+
2
GCAGAG
ruvX
883873
884289
-
Genic
365
NZ_CP028592.1
885861
885875
AACATC
14
-
2
TTGATG
gshB
884964
885911
-
Genic
36
NZ_CP028592.1
886146
886158
AAACTG
12
-
2
TTCAGT
rsmE
885924
886655
-
Genic
497
NZ_CP028592.1
887730
887742
AAGTGG
12
-
2
TCCACT
C9E72_RS04450
887537
888034
-
Genic
292
NZ_CP028592.1
888444
888457
ATCGCC
13
-
2
ATGGCG
C9E72_RS04455
888111
889505
-
Genic
1048
NZ_CP028592.1
888540
888552
AACGCT
12
-
2
AGCGTT
C9E72_RS04455
888111
889505
-
Genic
953
NZ_CP028592.1
892069
892082
ACCCGG
13
+
2
CCCGGA
speA
891891
893867
+
Genic
178
NZ_CP028592.1
893504
893516
ACCATC
12
-
2
GATGGT
speA
891891
893867
+
Genic
1613
NZ_CP028592.1
895264
895276
AGCGGC
12
-
2
CGCTGC
speB
894880
895800
+
Genic
384
NZ_CP028592.1
895750
895762
AGCGCC
12
-
2
CGCTGG
speB
894880
895800
+
Genic
870
NZ_CP028592.1
896827
896839
ACTGAG
12
-
2
CTCAGT
C9E72_RS04485
896006
896764
-
Intergenic
-63
NZ_CP028592.1
897205
897217
ACCGTG
12
+
2
TGACCG
tkt
897042
899033
+
Genic
163
NZ_CP028592.1
897780
897792
AAACCG
12
-
2
TCGGTT
tkt
897042
899033
+
Genic
738
NZ_CP028592.1
899325
899337
AAAAT
12
+
2
AAAAT
cmtB
899347
899790
+
Intergenic
-10
NZ_CP028592.1
899660
899673
ATCGGC
13
-
2
TGCCGA
cmtB
899347
899790
+
Genic
313
NZ_CP028592.1
901055
901068
ATCCGC
13
-
2
TGCGGA
C9E72_RS04500
899818
901206
+
Genic
1237
NZ_CP028592.1
901831
901843
ACC
12
-
4
GGT
C9E72_RS04505
901221
902498
+
Genic
610