Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 776 to 800 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
1512453
1512465
AAATAT
12
-
2
ATATTT
C9E72_RS07500
1512688
1513683
+
Intergenic
-223
NZ_CP028592.1
1515158
1515170
AACGTT
12
+
2
GTTAAC
C9E72_RS07505
1513691
1515124
-
Intergenic
-34
NZ_CP028592.1
1515222
1515234
AACGTT
12
+
2
GTTAAC
C9E72_RS07505
1513691
1515124
-
Intergenic
-98
NZ_CP028592.1
1518707
1518719
AAAATC
12
-
2
TTTTGA
C9E72_RS07520
1518171
1518797
-
Genic
78
NZ_CP028592.1
1521148
1521160
AACGTC
12
-
2
ACGTTG
C9E72_RS07530
1519463
1520875
+
Intergenic
1685
NZ_CP028592.1
1523878
1523890
AAGCAG
12
-
2
TTCTGC
C9E72_RS07555
1523834
1525047
-
Genic
1157
NZ_CP028592.1
1528834
1528848
AATAGC
14
-
2
ATTGCT
C9E72_RS07580
1528149
1529318
+
Genic
685
NZ_CP028592.1
1530151
1530163
AAGCAG
12
+
2
GCAGAA
C9E72_RS07590
1529545
1529796
-
Intergenic
-355
NZ_CP028592.1
1530538
1530550
ACCATG
12
-
2
GGTCAT
C9E72_RS07605
1531190
1531411
-
Intergenic
861
NZ_CP028592.1
1531820
1531833
AAGCAG
13
-
2
TCTGCT
C9E72_RS07615
1531802
1531993
-
Genic
160
NZ_CP028592.1
1535696
1535709
AAAGGC
13
-
2
TGCCTT
C9E72_RS07665
1535382
1535765
-
Genic
56
NZ_CP028592.1
1535723
1535736
AACGAG
13
+
2
ACGAGA
C9E72_RS07665
1535382
1535765
-
Genic
29
NZ_CP028592.1
1541892
1541904
AAATC
12
+
2
ATCAA
C9E72_RS07720
1541887
1542414
+
Genic
5
NZ_CP028592.1
1545185
1545258
AAATAG
73
-
12
TATTTC
C9E72_RS07740
1545457
1546023
+
Intergenic
-199
NZ_CP028592.1
1546015
1546027
AAATGT
12
+
2
AAATGT
C9E72_RS07745
1545998
1546609
+
Genic
17
NZ_CP028592.1
1546177
1546189
AAACAG
12
+
2
CAGAAA
C9E72_RS07745
1545998
1546609
+
Genic
179
NZ_CP028592.1
1546494
1546506
AATCG
12
+
2
AATCG
C9E72_RS07745
1545998
1546609
+
Genic
496
NZ_CP028592.1
1551049
1551061
AGGCGG
12
+
2
CGGAGG
C9E72_RS07785
1549464
1551404
+
Genic
1585
NZ_CP028592.1
1554002
1554015
AGCTCC
13
-
2
GAGCTG
C9E72_RS07820
1554097
1554282
+
Intergenic
-82
NZ_CP028592.1
1556980
1556992
ATCCGG
12
+
2
CCGGAT
C9E72_RS07840
1555862
1557568
+
Genic
1118
NZ_CP028592.1
1560806
1560819
AGAGGC
13
+
2
CAGAGG
C9E72_RS07850
1559870
1560877
+
Genic
936
NZ_CP028592.1
1560962
1560975
AACCGC
13
+
2
CAACCG
C9E72_RS07855
1560901
1562115
+
Genic
61
NZ_CP028592.1
1564260
1564272
ACACTC
12
-
2
GAGTGT
C9E72_RS07880
1564265
1566160
+
Genic
-5
NZ_CP028592.1
1564445
1564457
ACCGTC
12
-
2
CGGTGA
C9E72_RS07880
1564265
1566160
+
Genic
180
NZ_CP028592.1
1567797
1567809
ACCTG
12
+
2
CCTGA
C9E72_RS07890
1566516
1567712
-
Intergenic
-85