Showing repeats of Escherichia coli (NA)
Filter Panel
Chromosome
Start
Stop
Repeat Class
---------
A
C
AC
AG
AT
CG
AAC
AAG
AAT
ACC
ACG
ACT
AGC
AGG
ATC
CCG
AAAC
AAAG
AAAT
AACC
AACG
AACT
AAGC
AAGG
AAGT
AATC
AATG
AATT
ACAG
ACAT
ACCC
ACCG
ACCT
ACGC
ACGG
ACGT
ACTC
ACTG
AGAT
AGCC
AGCG
AGCT
AGGC
AGGG
ATCC
ATCG
ATGC
CCCG
CCGG
AAAAC
AAAAG
AAAAT
AAACC
AAACG
AAACT
AAAGC
AAAGG
AAAGT
AAATC
AAATG
AAATT
AACAC
AACAG
AACAT
AACCC
AACCG
AACCT
AACGC
AACGG
AACGT
AACTC
AACTG
AACTT
AAGAC
AAGAG
AAGAT
AAGCC
AAGCG
AAGCT
AAGGC
AAGGG
AAGGT
AAGTC
AAGTG
AATAC
AATAG
AATAT
AATCC
AATCG
AATCT
AATGC
AATGG
AATGT
AATTC
ACACC
ACACG
ACACT
ACAGC
ACAGG
ACAGT
ACATC
ACATG
ACCAG
ACCAT
ACCCC
ACCCG
ACCCT
ACCGC
ACCGG
ACCGT
ACCTC
ACCTG
ACGAG
ACGAT
ACGCC
ACGCG
ACGCT
ACGGC
ACGGG
ACGTC
ACTAG
ACTAT
ACTCC
ACTCG
ACTCT
ACTGC
ACTGG
AGAGC
AGAGG
AGATC
AGATG
AGCAT
AGCCC
AGCCG
AGCCT
AGCGC
AGCGG
AGCTC
AGGAT
AGGCC
AGGCG
AGGGC
AGGGG
ATATC
ATCCC
ATCCG
ATCGC
ATGCC
CCCCG
CCCGG
CCGCG
AAAAAC
AAAAAG
AAAAAT
AAAACC
AAAACG
AAAACT
AAAAGC
AAAAGG
AAAAGT
AAAATC
AAAATG
AAAATT
AAACAC
AAACAG
AAACAT
AAACCC
AAACCG
AAACCT
AAACGC
AAACGG
AAACGT
AAACTC
AAACTG
AAACTT
AAAGAC
AAAGAG
AAAGAT
AAAGCC
AAAGCG
AAAGCT
AAAGGC
AAAGGG
AAAGGT
AAAGTC
AAAGTG
AAAGTT
AAATAC
AAATAG
AAATAT
AAATCC
AAATCG
AAATCT
AAATGC
AAATGG
AAATGT
AAATTC
AAATTG
AAATTT
AACAAG
AACAAT
AACACC
AACACG
AACACT
AACAGC
AACAGG
AACAGT
AACATC
AACATG
AACATT
AACCAC
AACCAG
AACCAT
AACCCC
AACCCG
AACCCT
AACCGC
AACCGG
AACCGT
AACCTC
AACCTG
AACCTT
AACGAC
AACGAG
AACGAT
AACGCC
AACGCG
AACGCT
AACGGC
AACGGG
AACGGT
AACGTC
AACGTG
AACGTT
AACTAC
AACTAG
AACTAT
AACTCC
AACTCG
AACTCT
AACTGC
AACTGG
AACTGT
AACTTC
AACTTG
AAGAAT
AAGACC
AAGACG
AAGACT
AAGAGC
AAGAGG
AAGAGT
AAGATC
AAGATG
AAGATT
AAGCAC
AAGCAG
AAGCAT
AAGCCC
AAGCCG
AAGCCT
AAGCGC
AAGCGG
AAGCGT
AAGCTC
AAGCTG
AAGCTT
AAGGAC
AAGGAG
AAGGAT
AAGGCC
AAGGCG
AAGGCT
AAGGGC
AAGGGG
AAGGGT
AAGGTC
AAGGTG
AAGTAC
AAGTAG
AAGTAT
AAGTCC
AAGTCG
AAGTCT
AAGTGC
AAGTGG
AAGTGT
AATACC
AATACG
AATACT
AATAGC
AATAGG
AATAGT
AATATC
AATATG
AATATT
AATCAC
AATCAG
AATCAT
AATCCC
AATCCG
AATCCT
AATCGC
AATCGG
AATCGT
AATCTC
AATCTG
AATGAC
AATGAG
AATGAT
AATGCC
AATGCG
AATGCT
AATGGC
AATGGG
AATGGT
AATGTC
AATGTG
AATTAC
AATTAG
AATTAT
AATTCC
AATTCG
AATTGC
ACACAG
ACACAT
ACACCC
ACACCG
ACACCT
ACACGC
ACACGG
ACACGT
ACACTC
ACACTG
ACAGAG
ACAGAT
ACAGCC
ACAGCG
ACAGCT
ACAGGC
ACAGGG
ACAGGT
ACAGTC
ACAGTG
ACATAG
ACATAT
ACATCC
ACATCG
ACATCT
ACATGC
ACATGG
ACATGT
ACCACG
ACCACT
ACCAGC
ACCAGG
ACCAGT
ACCATC
ACCATG
ACCCAG
ACCCAT
ACCCCC
ACCCCG
ACCCCT
ACCCGC
ACCCGG
ACCCGT
ACCCTC
ACCCTG
ACCGAG
ACCGAT
ACCGCC
ACCGCG
ACCGCT
ACCGGC
ACCGGG
ACCGGT
ACCGTC
ACCGTG
ACCTAG
ACCTAT
ACCTCC
ACCTCG
ACCTCT
ACCTGC
ACCTGG
ACGACT
ACGAGC
ACGAGG
ACGAGT
ACGATC
ACGATG
ACGCAG
ACGCAT
ACGCCC
ACGCCG
ACGCCT
ACGCGC
ACGCGG
ACGCGT
ACGCTC
ACGCTG
ACGGAG
ACGGAT
ACGGCC
ACGGCG
ACGGCT
ACGGGC
ACGGGG
ACGTAG
ACGTAT
ACGTCC
ACGTCG
ACGTGC
ACTAGC
ACTAGG
ACTAGT
ACTATC
ACTATG
ACTCAG
ACTCAT
ACTCCC
ACTCCG
ACTCCT
ACTCGC
ACTCGG
ACTCTC
ACTCTG
ACTGAG
ACTGAT
ACTGCC
ACTGCG
ACTGCT
ACTGGC
ACTGGG
AGAGAT
AGAGCC
AGAGCG
AGAGCT
AGAGGC
AGAGGG
AGATAT
AGATCC
AGATCG
AGATCT
AGATGC
AGATGG
AGCAGG
AGCATC
AGCATG
AGCCAT
AGCCCC
AGCCCG
AGCCCT
AGCCGC
AGCCGG
AGCCTC
AGCCTG
AGCGAT
AGCGCC
AGCGCG
AGCGCT
AGCGGC
AGCGGG
AGCTAT
AGCTCC
AGCTCG
AGCTGC
AGGATC
AGGATG
AGGCAT
AGGCCC
AGGCCG
AGGCCT
AGGCGC
AGGCGG
AGGGAT
AGGGCC
AGGGCG
AGGGGC
AGGGGG
ATATCC
ATATCG
ATATGC
ATCATG
ATCCCC
ATCCCG
ATCCGC
ATCCGG
ATCGCC
ATCGCG
ATCGGC
ATGCCC
ATGCGC
ATGGCC
CCCCCG
CCCCGG
CCCGCG
CCCGGG
CCGCGG
CCGGCG
Repeat Length
-
Gene Name
Annotation
---------
Exon
Intron
Intergenic
Genic
Distance from TSS
-
Showing 826 to 850 repeats of 2959
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Export Table
Chromosome
Start
Stop
Repeat Class
Repeat Length
Strand
# Units
Actual Repeat
Gene Name
Gene Start
Gene Stop
Gene Strand
Annotation
Distance from TSS
NZ_CP028592.1
1613859
1613873
AAGCCG
14
-
2
GCTTCG
fabB
1612695
1613915
+
Genic
1164
NZ_CP028592.1
1614284
1614297
AACGGC
13
-
2
GTTGCC
C9E72_RS08110
1614190
1615368
+
Genic
94
NZ_CP028592.1
1614641
1614655
AATGG
14
+
2
ATGGA
C9E72_RS08110
1614190
1615368
+
Genic
451
NZ_CP028592.1
1616646
1616658
ACTGCC
12
+
2
CACTGC
pdxB
1616459
1617595
+
Genic
187
NZ_CP028592.1
1619794
1619807
AGCATC
13
-
2
TGCTGA
C9E72_RS08135
1619569
1620228
+
Genic
225
NZ_CP028592.1
1623756
1623768
AAAAAG
12
-
2
TTTTCT
cvpA
1623820
1624308
+
Intergenic
-52
NZ_CP028592.1
1625240
1625253
ATCCCG
13
+
2
GATCCC
purF
1624345
1625862
+
Genic
895
NZ_CP028592.1
1631426
1631439
AAGGAT
13
-
2
TCCTTA
C9E72_RS08195
1631044
1631934
+
Genic
382
NZ_CP028592.1
1634036
1634048
ACAGTG
12
+
2
GTGACA
C9E72_RS08215
1634098
1634742
+
Intergenic
-50
NZ_CP028592.1
1638179
1638192
AAACGT
13
+
2
CGTAAA
C9E72_RS08235
1637692
1639836
-
Genic
1644
NZ_CP028592.1
1638828
1638840
AACACC
12
-
2
GGTGTT
C9E72_RS08235
1637692
1639836
-
Genic
996
NZ_CP028592.1
1642828
1642840
AGCGCG
12
+
2
AGCGCG
hxpA
1642494
1643144
+
Genic
334
NZ_CP028592.1
1643782
1643795
ACCAGC
13
-
2
GTGCTG
C9E72_RS08260
1643231
1645063
+
Genic
551
NZ_CP028592.1
1644759
1644771
AAAC
12
-
3
TTGT
C9E72_RS08260
1643231
1645063
+
Genic
1528
NZ_CP028592.1
1645900
1645912
ACGGCC
12
+
2
CGGCCA
C9E72_RS08270
1645805
1647022
-
Genic
1110
NZ_CP028592.1
1646906
1646918
AAACTG
12
-
2
TTCAGT
C9E72_RS08270
1645805
1647022
-
Genic
104
NZ_CP028592.1
1647494
1647508
AACAT
14
+
2
TAACA
lrhA
1647942
1648880
+
Intergenic
-434
NZ_CP028592.1
1647669
1647682
AAATGT
13
-
2
ACATTT
lrhA
1647942
1648880
+
Intergenic
-260
NZ_CP028592.1
1647969
1647982
ACCTCG
13
+
2
ACCTCG
lrhA
1647942
1648880
+
Genic
27
NZ_CP028592.1
1647997
1648009
AACAGC
12
-
2
TGTTGC
lrhA
1647942
1648880
+
Genic
55
NZ_CP028592.1
1649822
1649834
AAAAAT
12
-
2
ATTTTT
nuoA
1649511
1649954
+
Genic
311
NZ_CP028592.1
1655220
1655234
AACCGT
14
-
2
CGGTTA
nuoG
1654418
1657144
+
Genic
802
NZ_CP028592.1
1657759
1657771
ACCGTC
12
+
2
GTCACC
nuoH
1657141
1658118
+
Genic
618
NZ_CP028592.1
1658007
1658019
ACGCGG
12
-
2
CCGCGT
nuoH
1657141
1658118
+
Genic
866
NZ_CP028592.1
1658059
1658071
ACGCTG
12
+
2
CGCTGA
nuoH
1657141
1658118
+
Genic
918